SMTL ID : 6g55.1

MamM CTD C267S

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.10, K.67, I.68, R.69, R.70 Chain C: A.6 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.69, A:R.70 Water bridges: A:R.69, A:R.70 Salt bridges: A:R.10, A:R.69, A:R.70 SO4.2: 5 residues within 4Å: Chain A: H.3, R.70 Chain C: H.3, R.70 Ligands: SO4.5 8 PLIP interactions: 4 interactions with chain C, 4 interactions with chain A Hydrogen bonds: C:H.3 Water bridges: C:R.70, C:R.70, A:H.3, A:R.70 Salt bridges: C:R.70, A:H.3, A:R.70 SO4.4: 6 residues within 4Å: Chain A: A.6 Chain C: R.10, K.67, I.68, R.69, R.70 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:R.69, C:R.70 Water bridges: C:R.69, C:R.70 Salt bridges: C:R.10, C:R.69, C:R.70 SO4.5: 5 residues within 4Å: Chain A: H.3, R.70 Chain C: H.3, R.70 Ligands: SO4.2 8 PLIP interactions: 4 interactions with chain C, 4 interactions with chain A Water bridges: C:H.3, C:R.70, A:R.70, A:R.70 Salt bridges: C:H.3, C:R.70, A:R.70 Hydrogen bonds: A:H.3

2 x BCT: BICARBONATE ION(Non-functional Binders)

BCT.3: 3 residues within 4Å: Chain A: G.20, R.22, D.45 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.22 Water bridges: A:D.45, A:D.45, A:N.48 BCT.6: 3 residues within 4Å: Chain C: G.20, R.22, D.45 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.22 Water bridges: C:D.45, C:N.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barber-Zucker, S. et al., Metal binding to the dynamic cytoplasmic domain of the cation diffusion facilitator (CDF) protein MamM induces a 'locked-in' configuration. Febs J. (2019)

Release Date

2018-10-31

Peptides

Magnetosome protein MamM: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
A

D
D

Magnetosome protein MamM