SMTL ID : 6g5t.1

Myoglobin H64V/V68A in the resting state, 1.5 Angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 18 residues within 4Å: Chain A: T.40, K.43, F.44, R.46, T.68, A.69, A.72, L.73, L.90, S.93, H.94, H.98, I.100, Y.104, L.105, I.108, F.139 Ligands: EDO.2 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:F.44, A:F.44, A:T.68, A:A.69, A:A.72, A:L.90, A:I.100, A:I.100, A:Y.104, A:L.105, A:I.108, A:I.108, A:F.139 Hydrogen bonds: A:S.93 Water bridges: A:P.89, A:S.93, A:K.97 Salt bridges: A:R.46, A:H.94, A:H.98 pi-Stacking: A:H.98 Metal complexes: A:H.94

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: L.30, F.44, V.65, A.69, I.108 Ligands: HEM.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayashi, T. et al., Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme. Nat Catal (2018)

Release Date

2018-08-22

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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