SMTL ID : 6g9s.1

Structural basis for the inhibition of E. coli PBP2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ET5: (3~{R},6~{S})-6-(aminomethyl)-4-(1,3-oxazol-5-yl)-3-(sulfooxyamino)-3,6-dihydro-2~{H}-pyridine-1-carboxylic acid(Covalent)

ET5.1: 10 residues within 4Å: Chain A: A.278, S.279, K.282, W.319, S.336, D.338, I.402, S.494, G.495, T.496 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.319 Hydrogen bonds: A:S.279, A:S.336, A:S.336, A:D.338, A:S.494, A:T.496, A:T.496 Water bridges: A:T.478, A:L.522 Salt bridges: A:K.521

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Levy, N. et al., Structural Basis for E. coli Penicillin Binding Protein (PBP) 2 Inhibition, a Platform for Drug Design. J.Med.Chem. (2019)

Release Date

2019-05-22

Peptides

Peptidoglycan D,D-transpeptidase MrdA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase MrdA

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