SMTL ID : 6g9t.1 (1 other biounit)

CRYSTAL STRUCTURE OF CMY-136 class C BETA-LACTAMASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: G.63, S.64, Y.150, H.221, G.317, S.318 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.64, A:S.64, A:Y.150, A:S.318, A:S.318 Water bridges: A:K.315, A:N.346, A:N.346 Salt bridges: A:H.221 PO4.2: 4 residues within 4Å: Chain A: D.47, N.50, W.201, P.208 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.47, A:N.50 Water bridges: A:D.47, A:D.47 PO4.3: 3 residues within 4Å: Chain A: S.343, Y.344, P.345 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.343

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 2 residues within 4Å: Chain A: R.80, G.81 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.81 Water bridges: A:E.82

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.5: 3 residues within 4Å: Chain A: E.172, R.176, Q.180 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.172 IPA.6: 4 residues within 4Å: Chain A: T.42, W.43, G.44, V.54 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.54, A:V.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zavala, A. et al., Genetic, Biochemical, and Structural Characterization of CMY-136 beta-Lactamase, a Peculiar CMY-2 Variant. Acs Infect Dis. (2019)

Release Date

2019-02-27

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase

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