SMTL ID : 6g9x.2 (1 other biounit)

Crystal structure of a MFS transporter at 2.54 Angstroem resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

5 x HG: MERCURY (II) ION(Non-covalent)

HG.1: 3 residues within 4Å: Chain A: C.362, G.363 Ligands: JKE.6 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.362, A:C.362 HG.2: 2 residues within 4Å: Chain A: C.56, C.57 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.56 HG.3: 1 residues within 4Å: Chain A: C.389 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.389 HG.4: 3 residues within 4Å: Chain A: F.53, C.57, G.366 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.57 HG.5: 3 residues within 4Å: Chain A: F.300, Q.303, C.394 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.394

1 x JKE: 2-sulfanylbenzoic acid(Non-covalent)

JKE.6: 8 residues within 4Å: Chain A: L.28, Y.119, L.145, R.280, Y.331, F.335, F.359 Ligands: HG.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.28, A:L.145, A:F.335, A:F.359 Salt bridges: A:R.280

3 x BNG: nonyl beta-D-glucopyranoside(Non-covalent)

BNG.7: 15 residues within 4Å: Chain A: G.25, L.28, Y.29, W.31, S.32, L.145, G.146, L.147, G.148, S.149, I.248, G.249, A.273, N.276 Ligands: BNG.8 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.28, A:W.31, A:I.248 Hydrogen bonds: A:G.146, A:S.149, A:N.276 BNG.8: 10 residues within 4Å: Chain A: R.46, A.50, F.53, L.245, H.250, Y.331, P.370, W.371, G.374 Ligands: BNG.7 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.53, A:L.245, A:P.370 Hydrogen bonds: A:H.250 BNG.9: 5 residues within 4Å: Chain A: S.271, F.274, V.317, S.321, W.329 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.274, A:F.274, A:W.329 Hydrogen bonds: A:S.321

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bosshart, P.D. et al., Mechanistic basis of L-lactate transport in the SLC16 solute carrier family. Nat Commun (2019)

Release Date

2019-07-03

Peptides

Major facilitator superfamily MFS_1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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Major facilitator superfamily MFS_1

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