SMTL ID : 6gb1.1

Crystal structure of the GLP1 receptor ECD with Peptide 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Q.20, R.23, R.27 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.20 Salt bridges: A:R.23, A:R.27 SO4.2: 5 residues within 4Å: Chain A: Y.25, Q.28, C.29, C.54, W.70 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.25, A:Q.28

2 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.3: 7 residues within 4Å: Chain A: Y.52, W.74, L.106, C.109, E.110, E.111 Chain B: I.15 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.74, A:L.106, A:E.110 Hydrogen bonds: A:Y.52, A:E.111 HEZ.4: 8 residues within 4Å: Chain A: V.19, W.22, R.23 Chain B: F.14, P.29, P.30, C.31, X.32 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:V.19, B:F.14, B:P.29 Hydrogen bonds: A:R.23, B:C.31, B:C.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Evers, A. et al., Dual Glucagon-like Peptide 1 (GLP-1)/Glucagon Receptor Agonists Specifically Optimized for Multidose Formulations. J. Med. Chem. (2018)

Release Date

2018-06-20

Peptides

Glucagon-like peptide 1 receptor: A
Peptide 11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucagon-like peptide 1 receptor

Peptide 11