SMTL ID : 6ged.1

Adhesin domain of PrgB from Enterococcus faecalis bound to DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: S.199, N.201, E.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.201, A:E.212

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: N.201, D.246, N.256 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.201, A:D.246 Water bridges: A:D.246, A:D.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmitt, A. et al., PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction. Mol. Microbiol. (2018)

Release Date

2018-05-16

Peptides

PrgB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PrgB

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