SMTL ID : 6gev.1

Mineralocorticoid receptor in complex with (s)-13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: E.34, P.35, Q.64, Q.67, V.68, L.97, L.98, A.101, K.161 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.34, A:Q.64, A:K.161 Water bridges: A:K.161 GOL.2: 8 residues within 4Å: Chain A: Q.113, F.114, L.115, F.123, N.124, E.125, M.128, H.141 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.115, A:F.123 GOL.3: 8 residues within 4Å: Chain A: S.96, T.168, H.220, V.223, S.224, L.227, V.259, A.264 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.96, A:T.168, A:H.220 Water bridges: A:H.220

1 x EWN: 6-[[(3~{S})-7-fluoranyl-3-(2-methylpropyl)-2,3-dihydro-1,4-benzoxazin-4-yl]carbonyl]-4~{H}-1,4-benzoxazin-3-one(Non-covalent)

EWN.4: 21 residues within 4Å: Chain A: L.57, N.58, L.60, A.61, Q.64, W.94, M.95, L.98, S.99, L.102, R.105, F.117, M.133, C.137, M.140, L.226, F.229, C.230, T.233, V.242, F.244 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.60, A:L.102, A:F.117, A:L.226 Hydrogen bonds: A:N.58, A:N.58, A:T.233 pi-Stacking: A:F.117 Halogen bonds: A:C.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Granberg, K.L. et al., Identification of Mineralocorticoid Receptor Modulators with Low Impact on Electrolyte Homeostasis but Maintained Organ Protection. J.Med.Chem. (2019)

Release Date

2019-01-09

Peptides

Mineralocorticoid receptor: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mineralocorticoid receptor

Nuclear receptor coactivator 1

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