SMTL ID : 6gh9.1 (1 other biounit)

USP15 catalytic domain in complex with small molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.166, E.168, C.169, C.215, C.218 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.166, A:C.169, A:C.215, A:C.218

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 4 residues within 4Å: Chain A: D.47, P.49, R.118, K.119 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:D.47

1 x MIX: 1,4-DIHYDROXY-5,8-BIS({2-[(2-HYDROXYETHYL)AMINO]ETHYL}AMINO)-9,10-ANTHRACENEDIONE(Non-covalent)

MIX.3: 6 residues within 4Å: Chain A: N.11, Y.290, G.291, G.295, H.297, D.314 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.290, A:Y.290 Hydrogen bonds: A:N.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ward, S.J. et al., The structure of the deubiquitinase USP15 reveals a misaligned catalytic triad and an open ubiquitin-binding channel. J. Biol. Chem. (2018)

Release Date

2018-09-26

Peptides

Ubiquitin carboxyl-terminal hydrolase 15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin carboxyl-terminal hydrolase 15

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