SMTL ID : 6ghd.1 (1 other biounit)

Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-2-1-mer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.17, H.23 Chain D: G.37 5 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B, 1 interactions with chain D Salt bridges: A:R.17, A:H.23, B:K.52 Water bridges: B:K.52, D:G.37 SO4.2: 5 residues within 4Å: Chain B: G.26, E.27, V.28, L.29, Q.72 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.26, B:E.27, B:V.28, B:L.29, B:Q.72 Water bridges: B:Q.72 SO4.3: 2 residues within 4Å: Chain B: R.59, R.74 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.59, B:R.74 SO4.4: 6 residues within 4Å: Chain D: S.3, K.5, A.23, G.24, K.71, D.75 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:S.3, D:G.24 Water bridges: D:K.5 Salt bridges: D:K.5, D:K.71 SO4.5: 2 residues within 4Å: Chain D: R.59, R.74 2 PLIP interactions: 2 interactions with chain D Salt bridges: D:R.59, D:R.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Samson, C. et al., Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases. Nucleic Acids Res. (2018)

Release Date

2018-08-08

Peptides

Emerin: A
Barrier-to-autointegration factor: BD
Prelamin-A/C: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
D

D
E

C
B

Emerin

Barrier-to-autointegration factor

Prelamin-A/C

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