SMTL ID : 6gji.1

Cyclophilin A complexed with the tri-vector ligand 8.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x F1E: ethyl 2-[[(4-aminophenyl)methyl-[(1-methyl-1,2,3-triazol-4-yl)methyl]carbamoyl]amino]ethanoate(Non-covalent)

F1E.1: 11 residues within 4Å: Chain A: R.55, Q.63, G.72, A.101, N.102, A.103, T.107, G.109, Q.111, F.113, H.126 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.101, A:F.113 Hydrogen bonds: A:Q.63, A:N.102, A:N.102, A:T.107 Water bridges: A:Q.111, A:Q.111 Salt bridges: A:H.126

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: K.82, F.83, E.84, N.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.84, A:E.84, A:N.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Simone, A. et al., A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors. Chem Sci (2019)

Release Date

2018-11-07

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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