SMTL ID : 6gjs.1

Human NBD1 of CFTR in complex with nanobodies D12 and T4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.48, Q.76 Ligands: ATP.2 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.48, H2O.2 MG.3: 2 residues within 4Å: Chain A: T.4, E.32 No protein-ligand interaction detected (PLIP)

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 12 residues within 4Å: Chain A: W.16, V.23, S.42, T.43, G.44, A.45, G.46, K.47, T.48, S.49, Q.76 Ligands: MG.1 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.44, A:A.45, A:G.46, A:G.46, A:K.47, A:T.48, A:T.48, A:S.49, A:S.49, A:Q.76, A:Q.76 Water bridges: A:T.43 Salt bridges: A:K.47, A:K.47 pi-Stacking: A:W.16, A:W.16, A:W.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sigoillot, M. et al., Domain-interface dynamics of CFTR revealed by stabilizing nanobodies. Nat Commun (2019)

Release Date

2019-06-26

Peptides

Cystic fibrosis transmembrane conductance regulator: A
Nanobody D12: B
Nanobody T4: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Cystic fibrosis transmembrane conductance regulator

Nanobody D12

Nanobody T4

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