SMTL ID : 6gjt.1 (1 other biounit)

Chlamydia protein Pgp3 studied at high resolution in a new crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-trimer

Ligands

14 x BR: BROMIDE ION(Non-covalent)

BR.1: 3 residues within 4Å: Chain A: N.203 Chain B: N.203 Chain C: N.203 Ligand excluded by PLIP BR.2: 3 residues within 4Å: Chain A: N.122 Chain C: M.162, P.260 Ligand excluded by PLIP BR.3: 3 residues within 4Å: Chain A: T.136, P.137, R.138 Ligand excluded by PLIP BR.7: 2 residues within 4Å: Chain B: E.229 Chain C: L.245 Ligand excluded by PLIP BR.8: 4 residues within 4Å: Chain A: M.162, P.260 Chain B: N.121, N.122 Ligand excluded by PLIP BR.9: 3 residues within 4Å: Chain B: K.128, N.242, D.243 Ligand excluded by PLIP BR.10: 2 residues within 4Å: Chain B: D.187, S.188 Ligand excluded by PLIP BR.11: 2 residues within 4Å: Chain B: E.185, S.222 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain B: T.136, P.137, R.138 Ligand excluded by PLIP BR.13: 2 residues within 4Å: Chain A: K.118 Chain C: K.118 Ligand excluded by PLIP BR.14: 4 residues within 4Å: Chain B: M.162, P.260 Chain C: N.121, N.122 Ligand excluded by PLIP BR.15: 5 residues within 4Å: Chain C: V.183, E.185, T.220, Y.221, S.222 Ligand excluded by PLIP BR.16: 3 residues within 4Å: Chain C: I.125, T.126, N.127 Ligand excluded by PLIP BR.17: 2 residues within 4Å: Chain C: D.187, S.188 Ligand excluded by PLIP

3 x K: POTASSIUM ION(Non-covalent)

K.4: 4 residues within 4Å: Chain A: E.175, Y.197 Chain B: Y.197 Chain C: Y.197 4 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:Y.197, B:Y.197, A:Y.197, H2O.3 K.5: 3 residues within 4Å: Chain A: E.185, Y.221, S.222 No protein-ligand interaction detected (PLIP) K.6: 2 residues within 4Å: Chain A: E.175 Chain B: S.199 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Metal complexes: B:S.199, A:E.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khurshid, S. et al., Chlamydia protein Pgp3 studied at high resolution in a new crystal form. IUCrJ (2018)

Release Date

2018-07-25

Peptides

Virulence plasmid protein pGP3-D: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Virulence plasmid protein pGP3-D

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