SMTL ID : 6gll.2 (1 other biounit)

Crystal structure of hMTH1 N33A in complex with LW14 in the presence of acetate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x BU8: 1~{H}-imidazo[4,5-b]pyridin-2-amine(Non-covalent)

BU8.1: 7 residues within 4Å: Chain A: F.98, F.100, M.107, W.143, D.145, D.146 Ligands: ACT.5 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.100 Water bridges: A:W.143, A:D.146 Salt bridges: A:D.145, A:D.146 pi-Stacking: A:F.98, A:W.143, A:W.143, A:W.143 pi-Cation interactions: A:W.143

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: H.160, R.177 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.177 Salt bridges: A:H.160, A:R.177 SO4.3: 3 residues within 4Å: Chain A: K.49, G.52, F.53 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.53 Water bridges: A:K.64 Salt bridges: A:K.49 SO4.4: 4 residues within 4Å: Chain A: R.177, V.179, D.180, T.181 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.180, A:T.181 Water bridges: A:R.177 Salt bridges: A:R.177

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 10 residues within 4Å: Chain A: L.35, L.37, L.46, A.59, G.60, M.142, D.146, W.149, F.150 Ligands: BU8.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.150 Hydrogen bonds: A:G.60, A:D.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eberle, S.A. et al., hMTH1 N33A in complex with LW14. To Be Published

Release Date

2019-02-20

Peptides

7,8-dihydro-8-oxoguanine triphosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

7,8-dihydro-8-oxoguanine triphosphatase

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