SMTL ID : 6glr.1 (1 other biounit)

Crystal structure of hMTH1 N33G in complex with TH scaffold 1 in the presence of acetate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x F3E: 4-phenylpyrimidin-2-amine(Non-covalent)

F3E.1: 8 residues within 4Å: Chain A: K.49, F.53, F.98, M.107, W.143, D.145, D.146 Ligands: ACT.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.49, A:F.53, A:W.143 Salt bridges: A:D.145, A:D.146 pi-Stacking: A:F.98, A:W.143, A:W.143 pi-Cation interactions: A:W.143 F3E.2: 8 residues within 4Å: Chain A: Y.33, F.53, F.100, E.103, E.105, L.106, M.107 Ligands: SO4.6 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.100 pi-Stacking: A:F.53 pi-Cation interactions: A:F.53, A:F.100

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 10 residues within 4Å: Chain A: L.35, L.37, L.46, G.59, G.60, M.142, D.146, W.149, F.150 Ligands: F3E.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.149, A:F.150 Hydrogen bonds: A:G.60

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: L.90, H.91, K.92 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.92 SO4.5: 2 residues within 4Å: Chain A: H.160, R.177 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.177, A:R.177 Salt bridges: A:H.160, A:R.177 SO4.6: 2 residues within 4Å: Chain A: F.53 Ligands: F3E.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eberle, S.A. et al., hMTH1 N33G in complex with TH scaffold 1. To Be Published

Release Date

2019-02-20

Peptides

7,8-dihydro-8-oxoguanine triphosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-dihydro-8-oxoguanine triphosphatase

Related Entries With Identical Sequence