SMTL ID : 6gt6.1

Crystal structure of recombinant coagulation factor beta-XIIa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN.1: 8 residues within 4Å: Chain A: Y.19, G.21, T.52, V.54, Q.57, N.61, H.62, S.63 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: P.83, V.84 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: Q.136, A.144, S.145, F.146 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.136, A:S.145, A:F.146, A:F.146, A:Q.148

1 x CYS: CYSTEINE(Non-covalent)

CYS.4: 3 residues within 4Å: Chain A: I.30, V.113, C.114 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pathak, M. et al., Crystal structures of the recombinant beta-factor XIIa protease with bound Thr-Arg and Pro-Arg substrate mimetics. Acta Crystallogr D Struct Biol (2019)

Release Date

2019-07-17

Peptides

Coagulation factor XII: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Coagulation factor XII