SMTL ID : 6gtg.1

Transition state structure of Cpf1(Cas12a) I4 conformation

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 7 residues within 4Å: Chain A: D.792, S.797, G.799, R.800, P.801 Chain B: U.15, A.16 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:R.800 MG.2: 4 residues within 4Å: Chain A: L.66, S.67, Y.248, N.270 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain A: N.802, K.1041 Chain B: G.17 No protein-ligand interaction detected (PLIP) MG.4: 3 residues within 4Å: Chain B: U.3, U.7, A.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stella, S. et al., Conformational Activation Promotes CRISPR-Cas12a Catalysis and Resetting of the Endonuclease Activity. Cell (2018)

Release Date

2018-12-19

Peptides

CRISPR-associated endonuclease Cas12a: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CRISPR-associated endonuclease Cas12a

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