SMTL ID : 6gto.1

Structure of the AtaR antitoxin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.97 Å

Oligo State

homo-dimer

Ligands

8 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: S.60, W.61 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.57 NA.2: 4 residues within 4Å: Chain A: Q.30, F.35, N.38 Chain B: R.43 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Q.30, B:R.43, B:R.43 NA.3: 2 residues within 4Å: Chain A: D.16, M.20 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.16 NA.4: 1 residues within 4Å: Chain A: S.19 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.19 NA.5: 2 residues within 4Å: Chain B: S.60, W.61 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.57 NA.6: 4 residues within 4Å: Chain A: R.43 Chain B: Q.30, F.35, N.38 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.43, A:R.43, B:Q.30 NA.7: 2 residues within 4Å: Chain B: D.16, M.20 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.16 NA.8: 1 residues within 4Å: Chain B: S.19 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.19, B:S.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jurenas, D. et al., Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol. (2019)

Release Date

2019-03-06

Peptides

DUF1778 domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

DUF1778 domain-containing protein

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