SMTL ID : 6gu6.1

CDK1/Cks2 in complex with Dinaciclib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 1QK: 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium(Non-covalent)

1QK.1: 21 residues within 4Å: Chain A: I.15, G.16, E.17, G.18, V.23, A.36, K.38, V.69, F.85, E.86, F.87, L.88, S.89, M.90, D.91, K.94, Q.137, N.138, L.140, A.150, D.151 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.23, A:A.36, A:V.69, A:F.85, A:Q.137, A:L.140 Hydrogen bonds: A:K.38, A:K.38, A:L.88, A:L.88 pi-Cation interactions: A:K.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wood, D.J. et al., Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition. Cell Chem Biol (2019)

Release Date

2018-12-05

Peptides

Cyclin-dependent kinase 1: A
Cyclin-dependent kinases regulatory subunit 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 1

Cyclin-dependent kinases regulatory subunit 2

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