SMTL ID : 6h5l.1

Kuenenia stuttgartiensis reducing HAO-like protein complex Kustc0457/Kustc0458

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-6-6-mer

Ligands

60 x HEC: HEME C(Covalent)

HEC.1: 22 residues within 4Å: Chain A: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Chain C: S.355, D.356, R.357 Chain D: L.33 Ligands: HEC.2, HEC.20 17 PLIP interactions: 13 interactions with chain A, 3 interactions with chain C, 1 interactions with chain D, Hydrophobic interactions: A:L.66, A:F.71, A:I.72, A:H.133, A:I.141, A:I.141, A:I.141, D:L.33 Hydrogen bonds: A:Y.60, A:Y.60, A:N.65, C:S.355, C:R.357 Water bridges: A:N.65 Metal complexes: A:H.68, A:H.84 Salt bridges: C:R.357 HEC.2: 24 residues within 4Å: Chain A: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Chain C: C.353, H.354, S.355, F.358 Ligands: HEC.1, HEC.3 17 PLIP interactions: 14 interactions with chain A, 3 interactions with chain C, Hydrophobic interactions: A:H.84, A:I.91, A:I.91, A:W.95, A:P.144, A:R.215, A:F.218, C:F.358 Hydrogen bonds: A:R.215, C:S.355 Water bridges: A:R.215, A:R.215 Salt bridges: A:K.208, A:R.215, C:H.354 Metal complexes: A:H.133, A:H.216 HEC.3: 19 residues within 4Å: Chain A: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.2, HEC.5 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:P.103, A:K.112, A:T.113, A:I.116, A:V.127, A:V.127, A:F.218, A:F.218 Hydrogen bonds: A:G.99, A:A.220 Water bridges: A:V.221 Salt bridges: A:K.112, A:H.153 Metal complexes: A:H.100, A:H.153 HEC.4: 21 residues within 4Å: Chain A: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Chain C: Q.480, D.481, W.484 Ligands: HEC.6, HEC.7 14 PLIP interactions: 9 interactions with chain A, 4 interactions with chain C, 1 Ligand-Water interactions, Hydrophobic interactions: A:P.169, A:V.181, A:V.181, A:Q.196, A:F.446, A:F.446, C:D.481, C:W.484, C:W.484, C:W.484 Salt bridges: A:R.168, A:K.473 Metal complexes: A:H.203, H2O.2 HEC.5: 19 residues within 4Å: Chain A: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.3, HEC.6 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:H.153, A:Q.156, A:Q.156, A:F.160, A:R.224, A:Q.281 Hydrogen bonds: A:Y.108, A:L.266 Water bridges: A:Q.156, A:R.224, A:R.224 Salt bridges: A:K.112, A:R.224 Metal complexes: A:H.213, A:H.294 HEC.6: 25 residues within 4Å: Chain A: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.4, HEC.5, HEC.7 11 PLIP interactions: 11 interactions with chain A, Hydrophobic interactions: A:P.169, A:V.211, A:V.211, A:Q.281, A:P.296, A:V.297 Hydrogen bonds: A:N.170 Salt bridges: A:H.203, A:R.303 Metal complexes: A:H.171, A:H.233 HEC.7: 24 residues within 4Å: Chain A: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.4, HEC.6, HEC.8 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:H.233, A:D.240, A:Y.244, A:Y.244, A:W.346, A:W.346, A:W.346, A:W.346, A:L.363, A:L.366, A:A.476 Hydrogen bonds: A:I.301, A:W.302, A:R.303, A:R.343, A:Y.472, A:Y.472 Water bridges: A:G.300 Salt bridges: A:H.284 pi-Cation interactions: A:H.284 Metal complexes: A:H.284, A:H.477 HEC.8: 21 residues within 4Å: Chain A: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Chain E: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Ligands: HEC.7 16 PLIP interactions: 10 interactions with chain A, 6 interactions with chain E, Hydrophobic interactions: A:I.252, A:T.277, A:P.278, A:F.358, A:F.358, A:Y.362, A:Y.362, A:L.363, E:R.215 Metal complexes: A:H.249, A:H.354 Hydrogen bonds: E:R.215 Salt bridges: E:K.208, E:K.208, E:R.215, E:R.215 HEC.9: 17 residues within 4Å: Chain B: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain B, Hydrophobic interactions: B:L.136, B:I.164, B:I.164, B:F.174, B:F.187, B:P.195, B:P.195, B:M.196, B:F.199 Hydrogen bonds: B:K.175, B:G.176 Water bridges: B:R.186 Salt bridges: B:K.50, B:K.175 Metal complexes: B:H.142 HEC.10: 24 residues within 4Å: Chain B: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.21 22 PLIP interactions: 22 interactions with chain B, Hydrophobic interactions: B:Y.18, B:R.42, B:F.44, B:F.44, B:Y.49, B:T.68, B:V.73, B:W.81, B:V.92 Hydrogen bonds: B:K.50, B:F.51, B:F.51 Salt bridges: B:R.42, B:R.42, B:K.50, B:K.175 pi-Stacking: B:H.23, B:H.23, B:H.23, B:H.23, B:F.44 Metal complexes: B:H.23 HEC.11: 22 residues within 4Å: Chain C: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Chain E: S.355, D.356, R.357 Chain F: L.33 Ligands: HEC.12, HEC.30 17 PLIP interactions: 13 interactions with chain C, 3 interactions with chain E, 1 interactions with chain F, Hydrophobic interactions: C:L.66, C:F.71, C:I.72, C:H.133, C:I.141, C:I.141, C:I.141, F:L.33 Hydrogen bonds: C:Y.60, C:Y.60, C:N.65, E:S.355, E:R.357 Water bridges: C:N.65 Metal complexes: C:H.68, C:H.84 Salt bridges: E:R.357 HEC.12: 24 residues within 4Å: Chain C: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Chain E: C.353, H.354, S.355, F.358 Ligands: HEC.11, HEC.13 17 PLIP interactions: 14 interactions with chain C, 3 interactions with chain E, Hydrophobic interactions: C:H.84, C:I.91, C:I.91, C:W.95, C:P.144, C:R.215, C:F.218, E:F.358 Hydrogen bonds: C:R.215, E:S.355 Water bridges: C:R.215, C:R.215 Salt bridges: C:K.208, C:R.215, E:H.354 Metal complexes: C:H.133, C:H.216 HEC.13: 19 residues within 4Å: Chain C: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.12, HEC.15 15 PLIP interactions: 15 interactions with chain C, Hydrophobic interactions: C:P.103, C:K.112, C:T.113, C:I.116, C:V.127, C:V.127, C:F.218, C:F.218 Hydrogen bonds: C:G.99, C:A.220 Water bridges: C:V.221 Salt bridges: C:K.112, C:H.153 Metal complexes: C:H.100, C:H.153 HEC.14: 21 residues within 4Å: Chain C: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Chain E: Q.480, D.481, W.484 Ligands: HEC.16, HEC.17 14 PLIP interactions: 9 interactions with chain C, 4 interactions with chain E, 1 Ligand-Water interactions, Hydrophobic interactions: C:P.169, C:V.181, C:V.181, C:Q.196, C:F.446, C:F.446, E:D.481, E:W.484, E:W.484, E:W.484 Salt bridges: C:R.168, C:K.473 Metal complexes: C:H.203, H2O.10 HEC.15: 19 residues within 4Å: Chain C: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.13, HEC.16 16 PLIP interactions: 16 interactions with chain C, Hydrophobic interactions: C:H.153, C:Q.156, C:Q.156, C:F.160, C:R.224, C:Q.281 Hydrogen bonds: C:Y.108, C:L.266 Water bridges: C:Q.156, C:R.224, C:R.224, C:V.267 Salt bridges: C:K.112, C:R.224 Metal complexes: C:H.213, C:H.294 HEC.16: 25 residues within 4Å: Chain C: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.14, HEC.15, HEC.17 11 PLIP interactions: 11 interactions with chain C, Hydrophobic interactions: C:P.169, C:V.211, C:V.211, C:Q.281, C:P.296, C:V.297 Hydrogen bonds: C:N.170 Salt bridges: C:H.203, C:R.303 Metal complexes: C:H.171, C:H.233 HEC.17: 24 residues within 4Å: Chain C: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.14, HEC.16, HEC.18 22 PLIP interactions: 22 interactions with chain C, Hydrophobic interactions: C:H.233, C:D.240, C:Y.244, C:Y.244, C:W.346, C:W.346, C:W.346, C:W.346, C:L.363, C:L.366, C:A.476 Hydrogen bonds: C:I.301, C:W.302, C:R.303, C:R.343, C:Y.472, C:Y.472 Water bridges: C:G.300 Salt bridges: C:H.284 pi-Cation interactions: C:H.284 Metal complexes: C:H.284, C:H.477 HEC.18: 21 residues within 4Å: Chain A: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Chain C: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Ligands: HEC.17 16 PLIP interactions: 10 interactions with chain C, 6 interactions with chain A, Hydrophobic interactions: C:I.252, C:T.277, C:P.278, C:F.358, C:F.358, C:Y.362, C:Y.362, C:L.363, A:R.215 Metal complexes: C:H.249, C:H.354 Hydrogen bonds: A:R.215 Salt bridges: A:K.208, A:K.208, A:R.215, A:R.215 HEC.19: 17 residues within 4Å: Chain D: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain D, Hydrophobic interactions: D:L.136, D:I.164, D:I.164, D:F.174, D:F.187, D:P.195, D:P.195, D:M.196, D:F.199 Hydrogen bonds: D:K.175, D:G.176 Water bridges: D:R.186 Salt bridges: D:K.50, D:K.175 Metal complexes: D:H.142 HEC.20: 24 residues within 4Å: Chain D: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.1 22 PLIP interactions: 22 interactions with chain D, Hydrophobic interactions: D:Y.18, D:R.42, D:F.44, D:F.44, D:Y.49, D:T.68, D:V.73, D:W.81, D:V.92 Hydrogen bonds: D:K.50, D:F.51, D:F.51 Salt bridges: D:R.42, D:R.42, D:K.50, D:K.175 pi-Stacking: D:H.23, D:H.23, D:H.23, D:H.23, D:F.44 Metal complexes: D:H.23 HEC.21: 22 residues within 4Å: Chain A: S.355, D.356, R.357 Chain B: L.33 Chain E: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Ligands: HEC.10, HEC.22 17 PLIP interactions: 3 interactions with chain A, 13 interactions with chain E, 1 interactions with chain B, Hydrogen bonds: A:S.355, A:R.357, E:Y.60, E:Y.60, E:N.65 Salt bridges: A:R.357 Hydrophobic interactions: E:L.66, E:F.71, E:I.72, E:H.133, E:I.141, E:I.141, E:I.141, B:L.33 Water bridges: E:N.65 Metal complexes: E:H.68, E:H.84 HEC.22: 24 residues within 4Å: Chain A: C.353, H.354, S.355, F.358 Chain E: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Ligands: HEC.21, HEC.23 17 PLIP interactions: 14 interactions with chain E, 3 interactions with chain A, Hydrophobic interactions: E:H.84, E:I.91, E:I.91, E:W.95, E:P.144, E:R.215, E:F.218, A:F.358 Hydrogen bonds: E:R.215, A:S.355 Water bridges: E:R.215, E:R.215 Salt bridges: E:K.208, E:R.215, A:H.354 Metal complexes: E:H.133, E:H.216 HEC.23: 19 residues within 4Å: Chain E: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.22, HEC.25 15 PLIP interactions: 15 interactions with chain E, Hydrophobic interactions: E:P.103, E:K.112, E:T.113, E:I.116, E:V.127, E:V.127, E:F.218, E:F.218 Hydrogen bonds: E:G.99, E:A.220 Water bridges: E:V.221 Salt bridges: E:K.112, E:H.153 Metal complexes: E:H.100, E:H.153 HEC.24: 21 residues within 4Å: Chain A: Q.480, D.481, W.484 Chain E: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Ligands: HEC.26, HEC.27 14 PLIP interactions: 4 interactions with chain A, 9 interactions with chain E, 1 Ligand-Water interactions, Hydrophobic interactions: A:D.481, A:W.484, A:W.484, A:W.484, E:P.169, E:V.181, E:V.181, E:Q.196, E:F.446, E:F.446 Salt bridges: E:R.168, E:K.473 Metal complexes: E:H.203, H2O.18 HEC.25: 19 residues within 4Å: Chain E: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.23, HEC.26 16 PLIP interactions: 16 interactions with chain E, Hydrophobic interactions: E:H.153, E:Q.156, E:Q.156, E:F.160, E:R.224, E:Q.281 Hydrogen bonds: E:Y.108, E:L.266 Water bridges: E:Q.156, E:R.224, E:R.224, E:V.267 Salt bridges: E:K.112, E:R.224 Metal complexes: E:H.213, E:H.294 HEC.26: 25 residues within 4Å: Chain E: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.24, HEC.25, HEC.27 11 PLIP interactions: 11 interactions with chain E, Hydrophobic interactions: E:P.169, E:V.211, E:V.211, E:Q.281, E:P.296, E:V.297 Hydrogen bonds: E:N.170 Salt bridges: E:H.203, E:R.303 Metal complexes: E:H.171, E:H.233 HEC.27: 24 residues within 4Å: Chain E: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.24, HEC.26, HEC.28 22 PLIP interactions: 22 interactions with chain E, Hydrophobic interactions: E:H.233, E:D.240, E:Y.244, E:Y.244, E:W.346, E:W.346, E:W.346, E:W.346, E:L.363, E:L.366, E:A.476 Hydrogen bonds: E:I.301, E:W.302, E:R.303, E:R.343, E:Y.472, E:Y.472 Water bridges: E:G.300 Salt bridges: E:H.284 pi-Cation interactions: E:H.284 Metal complexes: E:H.284, E:H.477 HEC.28: 21 residues within 4Å: Chain C: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Chain E: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Ligands: HEC.27 16 PLIP interactions: 6 interactions with chain C, 10 interactions with chain E, Hydrophobic interactions: C:R.215, E:I.252, E:T.277, E:P.278, E:F.358, E:F.358, E:Y.362, E:Y.362, E:L.363 Hydrogen bonds: C:R.215 Salt bridges: C:K.208, C:K.208, C:R.215, C:R.215 Metal complexes: E:H.249, E:H.354 HEC.29: 17 residues within 4Å: Chain F: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain F, Hydrophobic interactions: F:L.136, F:I.164, F:I.164, F:F.174, F:F.187, F:P.195, F:P.195, F:M.196, F:F.199 Hydrogen bonds: F:K.175, F:G.176 Water bridges: F:R.186 Salt bridges: F:K.50, F:K.175 Metal complexes: F:H.142 HEC.30: 24 residues within 4Å: Chain F: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.11 22 PLIP interactions: 22 interactions with chain F, Hydrophobic interactions: F:Y.18, F:R.42, F:F.44, F:F.44, F:Y.49, F:T.68, F:V.73, F:W.81, F:V.92 Hydrogen bonds: F:K.50, F:F.51, F:F.51 Salt bridges: F:R.42, F:R.42, F:K.50, F:K.175 pi-Stacking: F:H.23, F:H.23, F:H.23, F:H.23, F:F.44 Metal complexes: F:H.23 HEC.31: 22 residues within 4Å: Chain G: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Chain I: S.355, D.356, R.357 Chain J: L.33 Ligands: HEC.32, HEC.50 18 PLIP interactions: 13 interactions with chain G, 4 interactions with chain I, 1 interactions with chain J, Hydrophobic interactions: G:L.66, G:F.71, G:I.72, G:H.133, G:I.141, G:I.141, G:I.141, J:L.33 Hydrogen bonds: G:Y.53, G:Y.60, G:N.65, I:S.355, I:D.356, I:R.357 Water bridges: G:N.65 Metal complexes: G:H.68, G:H.84 Salt bridges: I:R.357 HEC.32: 24 residues within 4Å: Chain G: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Chain I: C.353, H.354, S.355, F.358 Ligands: HEC.31, HEC.33 17 PLIP interactions: 5 interactions with chain I, 12 interactions with chain G, Hydrophobic interactions: I:F.358, G:H.84, G:I.91, G:I.91, G:W.95, G:P.144, G:R.215, G:F.218 Hydrogen bonds: I:S.355, G:R.215 Water bridges: I:H.354, I:H.354 Salt bridges: I:H.354, G:K.208, G:R.215 Metal complexes: G:H.133, G:H.216 HEC.33: 19 residues within 4Å: Chain G: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.32, HEC.35 15 PLIP interactions: 15 interactions with chain G, Hydrophobic interactions: G:P.103, G:K.112, G:T.113, G:I.116, G:V.127, G:V.127, G:F.218, G:F.218 Hydrogen bonds: G:G.99, G:A.220 Water bridges: G:V.221 Salt bridges: G:K.112, G:H.153 Metal complexes: G:H.100, G:H.153 HEC.34: 21 residues within 4Å: Chain G: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Chain I: Q.480, D.481, W.484 Ligands: HEC.36, HEC.37 14 PLIP interactions: 9 interactions with chain G, 4 interactions with chain I, 1 Ligand-Water interactions, Hydrophobic interactions: G:P.169, G:V.181, G:V.181, G:Q.196, G:F.446, G:F.446, I:D.481, I:W.484, I:W.484, I:W.484 Salt bridges: G:R.168, G:K.473 Metal complexes: G:H.203, H2O.25 HEC.35: 19 residues within 4Å: Chain G: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.33, HEC.36 15 PLIP interactions: 15 interactions with chain G, Hydrophobic interactions: G:H.153, G:Q.156, G:Q.156, G:F.160, G:R.224, G:Q.281 Hydrogen bonds: G:L.266 Water bridges: G:Q.156, G:R.224, G:R.224, G:V.267 Salt bridges: G:K.112, G:R.224 Metal complexes: G:H.213, G:H.294 HEC.36: 25 residues within 4Å: Chain G: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.34, HEC.35, HEC.37 11 PLIP interactions: 11 interactions with chain G, Hydrophobic interactions: G:P.169, G:V.211, G:V.211, G:Q.281, G:P.296, G:V.297 Hydrogen bonds: G:N.170 Salt bridges: G:H.203, G:R.303 Metal complexes: G:H.171, G:H.233 HEC.37: 24 residues within 4Å: Chain G: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.34, HEC.36, HEC.38 22 PLIP interactions: 22 interactions with chain G, Hydrophobic interactions: G:H.233, G:D.240, G:Y.244, G:Y.244, G:W.346, G:W.346, G:W.346, G:W.346, G:L.363, G:L.366, G:A.476 Hydrogen bonds: G:I.301, G:W.302, G:R.303, G:R.343, G:Y.472, G:Y.472 Water bridges: G:G.300 Salt bridges: G:H.284 pi-Cation interactions: G:H.284 Metal complexes: G:H.284, G:H.477 HEC.38: 21 residues within 4Å: Chain G: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Chain K: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Ligands: HEC.37 16 PLIP interactions: 10 interactions with chain G, 6 interactions with chain K, Hydrophobic interactions: G:I.252, G:T.277, G:P.278, G:F.358, G:F.358, G:Y.362, G:Y.362, G:L.363, K:R.215 Metal complexes: G:H.249, G:H.354 Hydrogen bonds: K:R.215 Salt bridges: K:K.208, K:K.208, K:R.215, K:R.215 HEC.39: 17 residues within 4Å: Chain H: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain H, Hydrophobic interactions: H:L.136, H:I.164, H:I.164, H:F.174, H:F.187, H:P.195, H:P.195, H:M.196, H:F.199 Hydrogen bonds: H:K.175, H:G.176 Water bridges: H:R.186 Salt bridges: H:K.50, H:K.175 Metal complexes: H:H.142 HEC.40: 24 residues within 4Å: Chain H: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.51 22 PLIP interactions: 22 interactions with chain H, Hydrophobic interactions: H:Y.18, H:R.42, H:F.44, H:F.44, H:Y.49, H:T.68, H:V.73, H:W.81, H:V.92 Hydrogen bonds: H:K.50, H:F.51, H:F.51 Salt bridges: H:R.42, H:R.42, H:K.50, H:K.175 pi-Stacking: H:H.23, H:H.23, H:H.23, H:H.23, H:F.44 Metal complexes: H:H.23 HEC.41: 22 residues within 4Å: Chain I: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Chain K: S.355, D.356, R.357 Chain L: L.33 Ligands: HEC.42, HEC.60 18 PLIP interactions: 13 interactions with chain I, 4 interactions with chain K, 1 interactions with chain L, Hydrophobic interactions: I:L.66, I:F.71, I:I.72, I:H.133, I:I.141, I:I.141, I:I.141, L:L.33 Hydrogen bonds: I:Y.53, I:Y.60, I:N.65, K:S.355, K:D.356, K:R.357 Water bridges: I:N.65 Metal complexes: I:H.68, I:H.84 Salt bridges: K:R.357 HEC.42: 24 residues within 4Å: Chain I: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Chain K: C.353, H.354, S.355, F.358 Ligands: HEC.41, HEC.43 17 PLIP interactions: 12 interactions with chain I, 5 interactions with chain K, Hydrophobic interactions: I:H.84, I:I.91, I:I.91, I:W.95, I:P.144, I:R.215, I:F.218, K:F.358 Hydrogen bonds: I:R.215, K:S.355 Salt bridges: I:K.208, I:R.215, K:H.354 Metal complexes: I:H.133, I:H.216 Water bridges: K:H.354, K:H.354 HEC.43: 19 residues within 4Å: Chain I: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.42, HEC.45 15 PLIP interactions: 15 interactions with chain I, Hydrophobic interactions: I:P.103, I:K.112, I:T.113, I:I.116, I:V.127, I:V.127, I:F.218, I:F.218 Hydrogen bonds: I:G.99, I:A.220 Water bridges: I:V.221 Salt bridges: I:K.112, I:H.153 Metal complexes: I:H.100, I:H.153 HEC.44: 21 residues within 4Å: Chain I: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Chain K: Q.480, D.481, W.484 Ligands: HEC.46, HEC.47 14 PLIP interactions: 4 interactions with chain K, 9 interactions with chain I, 1 Ligand-Water interactions, Hydrophobic interactions: K:D.481, K:W.484, K:W.484, K:W.484, I:P.169, I:V.181, I:V.181, I:Q.196, I:F.446, I:F.446 Salt bridges: I:R.168, I:K.473 Metal complexes: I:H.203, H2O.33 HEC.45: 19 residues within 4Å: Chain I: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.43, HEC.46 14 PLIP interactions: 14 interactions with chain I, Hydrophobic interactions: I:H.153, I:Q.156, I:Q.156, I:F.160, I:R.224, I:Q.281 Hydrogen bonds: I:L.266 Water bridges: I:Q.156, I:R.224, I:R.224 Salt bridges: I:K.112, I:R.224 Metal complexes: I:H.213, I:H.294 HEC.46: 25 residues within 4Å: Chain I: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.44, HEC.45, HEC.47 11 PLIP interactions: 11 interactions with chain I, Hydrophobic interactions: I:P.169, I:V.211, I:V.211, I:Q.281, I:P.296, I:V.297 Hydrogen bonds: I:N.170 Salt bridges: I:H.203, I:R.303 Metal complexes: I:H.171, I:H.233 HEC.47: 24 residues within 4Å: Chain I: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.44, HEC.46, HEC.48 22 PLIP interactions: 22 interactions with chain I, Hydrophobic interactions: I:H.233, I:D.240, I:Y.244, I:Y.244, I:W.346, I:W.346, I:W.346, I:W.346, I:L.363, I:L.366, I:A.476 Hydrogen bonds: I:I.301, I:W.302, I:R.303, I:R.343, I:Y.472, I:Y.472 Water bridges: I:G.300 Salt bridges: I:H.284 pi-Cation interactions: I:H.284 Metal complexes: I:H.284, I:H.477 HEC.48: 21 residues within 4Å: Chain G: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Chain I: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Ligands: HEC.47 16 PLIP interactions: 10 interactions with chain I, 6 interactions with chain G, Hydrophobic interactions: I:I.252, I:T.277, I:P.278, I:F.358, I:F.358, I:Y.362, I:Y.362, I:L.363, G:R.215 Metal complexes: I:H.249, I:H.354 Hydrogen bonds: G:R.215 Salt bridges: G:K.208, G:K.208, G:R.215, G:R.215 HEC.49: 17 residues within 4Å: Chain J: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain J, Hydrophobic interactions: J:L.136, J:I.164, J:I.164, J:F.174, J:F.187, J:P.195, J:P.195, J:M.196, J:F.199 Hydrogen bonds: J:K.175, J:G.176 Water bridges: J:R.186 Salt bridges: J:K.50, J:K.175 Metal complexes: J:H.142 HEC.50: 24 residues within 4Å: Chain J: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.31 22 PLIP interactions: 22 interactions with chain J, Hydrophobic interactions: J:Y.18, J:R.42, J:F.44, J:F.44, J:Y.49, J:T.68, J:V.73, J:W.81, J:V.92 Hydrogen bonds: J:K.50, J:F.51, J:F.51 Salt bridges: J:R.42, J:R.42, J:K.50, J:K.175 pi-Stacking: J:H.23, J:H.23, J:H.23, J:H.23, J:F.44 Metal complexes: J:H.23 HEC.51: 22 residues within 4Å: Chain G: S.355, D.356, R.357 Chain H: L.33 Chain K: Y.53, Y.60, M.63, N.65, L.66, H.68, F.71, I.72, L.79, C.80, C.83, H.84, C.129, H.133, I.141, M.143 Ligands: HEC.40, HEC.52 18 PLIP interactions: 13 interactions with chain K, 4 interactions with chain G, 1 interactions with chain H, Hydrophobic interactions: K:L.66, K:F.71, K:I.72, K:H.133, K:I.141, K:I.141, K:I.141, H:L.33 Hydrogen bonds: K:Y.53, K:Y.60, K:N.65, G:S.355, G:D.356, G:R.357 Water bridges: K:N.65 Metal complexes: K:H.68, K:H.84 Salt bridges: G:R.357 HEC.52: 24 residues within 4Å: Chain G: C.353, H.354, S.355, F.358 Chain K: Y.53, P.56, H.84, I.91, W.95, H.100, V.127, H.128, C.129, C.132, H.133, M.143, P.144, K.208, D.210, R.215, H.216, F.218 Ligands: HEC.51, HEC.53 17 PLIP interactions: 12 interactions with chain K, 5 interactions with chain G, Hydrophobic interactions: K:H.84, K:I.91, K:I.91, K:W.95, K:P.144, K:R.215, K:F.218, G:F.358 Hydrogen bonds: K:R.215, G:S.355 Salt bridges: K:K.208, K:R.215, G:H.354 Metal complexes: K:H.133, K:H.216 Water bridges: G:H.354, G:H.354 HEC.53: 19 residues within 4Å: Chain K: G.99, H.100, P.103, L.109, K.112, T.113, I.116, V.127, V.148, C.149, C.152, H.153, C.209, H.213, F.218, S.219, A.220 Ligands: HEC.52, HEC.55 15 PLIP interactions: 15 interactions with chain K, Hydrophobic interactions: K:P.103, K:K.112, K:T.113, K:I.116, K:V.127, K:V.127, K:F.218, K:F.218 Hydrogen bonds: K:G.99, K:A.220 Water bridges: K:V.221 Salt bridges: K:K.112, K:H.153 Metal complexes: K:H.100, K:H.153 HEC.54: 21 residues within 4Å: Chain G: Q.480, D.481, W.484 Chain K: R.168, P.169, A.177, V.181, W.183, Q.196, G.198, C.199, C.202, H.203, C.232, H.233, H.238, M.304, F.446, K.473 Ligands: HEC.56, HEC.57 14 PLIP interactions: 9 interactions with chain K, 4 interactions with chain G, 1 Ligand-Water interactions, Hydrophobic interactions: K:P.169, K:V.181, K:V.181, K:Q.196, K:F.446, K:F.446, G:D.481, G:W.484, G:W.484, G:W.484 Salt bridges: K:R.168, K:K.473 Metal complexes: K:H.203, H2O.40 HEC.55: 19 residues within 4Å: Chain K: Y.108, K.112, C.149, H.153, Q.156, F.160, H.171, C.209, C.212, H.213, G.223, R.224, P.265, L.266, Q.281, M.285, H.294 Ligands: HEC.53, HEC.56 15 PLIP interactions: 15 interactions with chain K, Hydrophobic interactions: K:H.153, K:Q.156, K:Q.156, K:F.160, K:R.224, K:Q.281 Hydrogen bonds: K:L.266 Water bridges: K:Q.156, K:R.224, K:R.224, K:V.267 Salt bridges: K:K.112, K:R.224 Metal complexes: K:H.213, K:H.294 HEC.56: 25 residues within 4Å: Chain K: R.168, P.169, N.170, H.171, Q.173, S.174, A.177, C.202, H.203, G.205, V.211, C.212, A.228, C.229, C.232, H.233, Q.281, H.284, P.296, V.297, R.303, M.304 Ligands: HEC.54, HEC.55, HEC.57 11 PLIP interactions: 11 interactions with chain K, Hydrophobic interactions: K:P.169, K:V.211, K:V.211, K:Q.281, K:P.296, K:V.297 Hydrogen bonds: K:N.170 Salt bridges: K:H.203, K:R.303 Metal complexes: K:H.171, K:H.233 HEC.57: 24 residues within 4Å: Chain K: H.233, D.240, Y.244, H.249, P.278, T.279, C.280, C.283, H.284, G.300, I.301, W.302, R.303, R.343, W.346, L.363, L.366, Y.472, K.473, A.476, H.477 Ligands: HEC.54, HEC.56, HEC.58 22 PLIP interactions: 22 interactions with chain K, Hydrophobic interactions: K:H.233, K:D.240, K:Y.244, K:Y.244, K:W.346, K:W.346, K:W.346, K:W.346, K:L.363, K:L.366, K:A.476 Hydrogen bonds: K:I.301, K:W.302, K:R.303, K:R.343, K:Y.472, K:Y.472 Water bridges: K:G.300 Salt bridges: K:H.284 pi-Cation interactions: K:H.284 Metal complexes: K:H.284, K:H.477 HEC.58: 21 residues within 4Å: Chain I: W.54, D.94, M.201, K.208, D.210, T.214, R.215 Chain K: K.248, H.249, I.252, R.276, T.277, P.278, V.349, C.350, C.353, H.354, F.358, Y.362, L.363 Ligands: HEC.57 16 PLIP interactions: 10 interactions with chain K, 6 interactions with chain I, Hydrophobic interactions: K:I.252, K:T.277, K:P.278, K:F.358, K:F.358, K:Y.362, K:Y.362, K:L.363, I:R.215 Metal complexes: K:H.249, K:H.354 Hydrogen bonds: I:R.215 Salt bridges: I:K.208, I:K.208, I:R.215, I:R.215 HEC.59: 17 residues within 4Å: Chain L: K.50, L.136, C.138, C.141, H.142, Q.156, I.164, F.167, F.174, K.175, G.176, R.186, F.187, P.195, M.196, F.199, L.211 15 PLIP interactions: 15 interactions with chain L, Hydrophobic interactions: L:L.136, L:I.164, L:I.164, L:F.174, L:F.187, L:P.195, L:P.195, L:M.196, L:F.199 Hydrogen bonds: L:K.175, L:G.176 Water bridges: L:R.186 Salt bridges: L:K.50, L:K.175 Metal complexes: L:H.142 HEC.60: 24 residues within 4Å: Chain L: Y.18, C.19, C.22, H.23, M.37, P.39, K.40, P.41, R.42, F.44, Y.49, K.50, F.51, T.68, I.69, V.73, S.76, T.77, M.78, W.81, V.92, L.96, K.175 Ligands: HEC.41 22 PLIP interactions: 22 interactions with chain L, Hydrophobic interactions: L:Y.18, L:R.42, L:F.44, L:F.44, L:Y.49, L:T.68, L:V.73, L:W.81, L:V.92 Hydrogen bonds: L:K.50, L:F.51, L:F.51 Salt bridges: L:R.42, L:R.42, L:K.50, L:K.175 pi-Stacking: L:H.23, L:H.23, L:H.23, L:H.23, L:F.44 Metal complexes: L:H.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dietl, A. et al., A 60-heme reductase complex from an anammox bacterium shows an extended electron transfer pathway. Acta Crystallogr D Struct Biol (2019)

Release Date

2019-04-10

Peptides

Similar to hydroxylamine oxidoreductase: ACEGIK
Conserved hypothetical cytochrome protein: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

G
A

I
A

K
A

B
B

D
B

F
B

H
B

J
B

L
B

Similar to hydroxylamine oxidoreductase

Conserved hypothetical cytochrome protein