SMTL ID : 6h6a.2 (2 other biounits)

Crystal structure of UNC119 in complex with LCK peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: K.115, S.116, F.117, D.118, F.119 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.115, A:K.115, A:D.118, A:D.118 GOL.2: 7 residues within 4Å: Chain A: I.28, D.29, F.30, G.68, R.69, M.170, N.172 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.29, A:F.30, A:N.172 Water bridges: A:R.69, A:H.171

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 3 residues within 4Å: Chain A: H.152, P.153, E.155 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.155, A:E.155 Salt bridges: A:H.152

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.4: 15 residues within 4Å: Chain A: F.33, I.35, V.71, Y.73, L.80, E.105, L.114, F.117, Y.136, F.138, P.139, Y.176 Chain B: G.1, C.2, G.3 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.33, A:I.35, A:Y.73, A:L.80, A:L.114, A:F.117, A:F.138, A:P.139 Hydrogen bonds: A:Y.73, B:G.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stephen, L.A. et al., The Ciliary Machinery Is Repurposed for T Cell Immune Synapse Trafficking of LCK. Dev.Cell (2018)

Release Date

2018-09-26

Peptides

Protein unc-119 homolog A: A
GLY-CYS-GLY-CYS-SER-SER: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Protein unc-119 homolog A

GLY-CYS-GLY-CYS-SER-SER

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