SMTL ID : 6h6n.1

UbiJ-SCP2 Ubiquinone synthesis protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

homo-dimer

Ligands

2 x TB: TERBIUM(III) ION(Non-covalent)

TB.1: 1 residues within 4Å: Chain A: E.51 No protein-ligand interaction detected (PLIP) TB.7: 1 residues within 4Å: Chain B: E.73 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.73, B:E.73, H2O.5

6 x CA: CALCIUM ION(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: D.79 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.79, A:D.79, H2O.1, H2O.2 CA.3: 2 residues within 4Å: Chain A: D.77, A.78 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.77, A:D.77, H2O.2 CA.4: 3 residues within 4Å: Chain A: A.126, D.129, A.131 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:A.126, A:D.129, A:A.131, H2O.1, H2O.1 CA.5: 2 residues within 4Å: Chain A: E.23, D.69 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.23, A:E.23, A:D.69, H2O.1, H2O.2 CA.6: 4 residues within 4Å: Chain A: R.93, D.94, D.124, E.127 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.124, A:E.127 CA.8: 3 residues within 4Å: Chain B: D.124, E.127, D.129 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.124, B:E.127, B:D.129, H2O.3, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hajj Chehade, M. et al., A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone. Cell Chem Biol (2019)

Release Date

2019-02-13

Peptides

Ubiquinone biosynthesis protein UbiJ: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquinone biosynthesis protein UbiJ

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