SMTL ID : 6h7s.1

Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant in complex with L-2-keto-3deoxy-gluconate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-tetramer

Ligands

4 x FW2: L-2-keto-3deoxy-gluconate(Covalent)

FW2.1: 14 residues within 4Å: Chain A: P.6, F.38, G.41, T.42, T.43, Y.129, Y.131, K.154, V.156, G.178, S.179, V.195, A.196, L.197 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:P.6, A:P.6, A:K.154, A:V.195 Hydrogen bonds: A:T.42, A:T.43, A:Y.129, A:Y.131, A:Y.131, A:G.178, A:L.197 Salt bridges: A:K.154 FW2.2: 13 residues within 4Å: Chain B: P.6, F.38, G.41, T.42, T.43, Y.129, Y.131, K.154, V.156, G.178, V.195, L.197, S.240 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:P.6, B:K.154, B:L.197 Hydrogen bonds: B:T.42, B:T.42, B:T.43, B:T.43, B:Y.131 Salt bridges: B:K.154 FW2.3: 14 residues within 4Å: Chain C: P.6, F.38, G.41, T.42, T.43, Y.129, Y.131, K.154, V.156, G.178, S.179, V.195, A.196, L.197 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:P.6, C:P.6, C:K.154, C:V.195 Hydrogen bonds: C:T.42, C:T.43, C:Y.129, C:Y.131, C:Y.131, C:G.178, C:L.197 Salt bridges: C:K.154 FW2.4: 13 residues within 4Å: Chain D: P.6, F.38, G.41, T.42, T.43, Y.129, Y.131, K.154, V.156, G.178, V.195, L.197, S.240 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:P.6, D:K.154, D:L.197 Hydrogen bonds: D:T.42, D:T.42, D:T.43, D:T.43, D:Y.131 Salt bridges: D:K.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crennell, S.J. et al., Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant. To Be Published

Release Date

2019-08-14

Peptides

2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase

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