SMTL ID : 6h83.1

MamM CTD D249H - Copper form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 2 residues within 4Å: Chain A: H.54, E.58 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.54, H2O.2, H2O.2, H2O.2 CU.6: 2 residues within 4Å: Chain B: H.54, E.58 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.54, H2O.3, H2O.4, H2O.4

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.70 Chain B: H.3, R.70 Ligands: SO4.7 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Water bridges: A:R.70, B:R.70, B:R.70, B:R.70 Salt bridges: A:R.70, B:R.70 SO4.3: 6 residues within 4Å: Chain A: R.10, K.67, I.68, R.69, R.70 Chain B: A.6 6 PLIP interactions: 1 interactions with chain B, 5 interactions with chain A Water bridges: B:R.10, A:R.70 Hydrogen bonds: A:R.69, A:R.70 Salt bridges: A:R.10, A:R.70 SO4.7: 4 residues within 4Å: Chain A: H.3, R.70 Chain B: R.70 Ligands: SO4.2 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Water bridges: A:R.70, A:R.70, A:R.70, B:R.70 Salt bridges: A:R.70, B:R.70 SO4.8: 6 residues within 4Å: Chain A: A.6 Chain B: R.10, K.67, I.68, R.69, R.70 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.69, B:R.70 Water bridges: B:R.70, A:R.10 Salt bridges: B:R.10, B:R.70

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.4: 6 residues within 4Å: Chain A: Q.61, C.65, I.71, E.72, S.73, L.74 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.61, A:L.74, A:L.74 BME.9: 6 residues within 4Å: Chain B: Q.61, C.65, I.71, E.72, S.73, L.74 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.61, B:L.74, B:L.74

2 x NA: SODIUM ION(Non-functional Binders)

NA.5: 1 residues within 4Å: Chain A: E.55 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.55 Water bridges: A:Q.52 NA.10: 1 residues within 4Å: Chain B: E.55 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.55 Water bridges: B:Q.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barber-Zucker, S. et al., MamM CTD D249H - Copper form. To Be Published

Release Date

2019-08-14

Peptides

Magnetosome protein MamM, Cation efflux protein family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Magnetosome protein MamM, Cation efflux protein family

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