- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x B12: COBALAMIN(Non-covalent)
- 2 x 8ZB: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-propyl-oxolane-3,4-diol(Non-covalent)
8ZB.2: 13 residues within 4Å:- Chain B: R.66, A.67, G.68, T.94, N.123, G.124, M.294, K.326, E.330, I.334, P.335
- Ligands: B12.1, TAR.3
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:R.66, B:G.68, B:G.68, B:K.326, B:K.326
- Water bridges: B:E.330, B:E.330
8ZB.5: 13 residues within 4Å:- Chain D: R.66, A.67, G.68, T.94, N.123, G.124, M.294, K.326, E.330, I.334, P.335
- Ligands: B12.4, TAR.6
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:G.68, D:G.68, D:K.326, D:K.326
- Water bridges: D:R.66
- 2 x TAR: D(-)-TARTARIC ACID(Non-covalent)
TAR.3: 13 residues within 4Å:- Chain B: R.66, T.94, R.100, R.149, H.150, E.171, Y.177, Y.181, F.216, H.291, M.294
- Ligands: B12.1, 8ZB.2
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:H.150, B:H.150, B:Y.177, B:Y.181
- Water bridges: B:R.66
- Salt bridges: B:R.66, B:R.100, B:R.149, B:H.291
TAR.6: 12 residues within 4Å:- Chain D: R.66, T.94, R.100, R.149, H.150, E.171, Y.177, Y.181, F.216, H.291
- Ligands: B12.4, 8ZB.5
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:H.150, D:E.171, D:Y.181, D:Y.181
- Salt bridges: D:R.66, D:R.100, D:R.149, D:H.291
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gruber, K. et al., Structure-Based Demystification of Radical Catalysis by a Coenzyme B 12 Dependent Enzyme-Crystallographic Study of Glutamate Mutase with Cofactor Homologues. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2019-08-14
- Peptides
- Glutamate mutase sigma subunit: AC
Glutamate mutase epsilon subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x B12: COBALAMIN(Non-covalent)
- 2 x 8ZB: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-propyl-oxolane-3,4-diol(Non-covalent)
- 2 x TAR: D(-)-TARTARIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gruber, K. et al., Structure-Based Demystification of Radical Catalysis by a Coenzyme B 12 Dependent Enzyme-Crystallographic Study of Glutamate Mutase with Cofactor Homologues. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2019-08-14
- Peptides
- Glutamate mutase sigma subunit: AC
Glutamate mutase epsilon subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D