SMTL ID : 6h9u.1

Crystal structure of the BiP NBD and MANF SAP complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MLT: D-MALATE(Non-covalent)

MLT.1: 3 residues within 4Å: Chain A: K.96, K.98, Y.100 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.96, A:T.97, A:K.98 Water bridges: A:Y.100 Salt bridges: A:K.98, A:K.98

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: T.10, T.11, Y.12 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.10, A:T.11, A:Y.12, A:Y.12, A:G.200 Water bridges: A:T.10, A:T.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, Y. et al., MANF antagonizes nucleotide exchange by the endoplasmic reticulum chaperone BiP. Nat Commun (2019)

Release Date

2019-02-06

Peptides

Endoplasmic reticulum chaperone BiP: A
Mesencephalic astrocyte-derived neurotrophic factor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Endoplasmic reticulum chaperone BiP

Mesencephalic astrocyte-derived neurotrophic factor