SMTL ID : 6hah.1

Crystal structure of PAF - p-sulfonatocalix[6]arene complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x FWQ: p-sulfonatocalix[6]arene(Non-covalent)

FWQ.1: 9 residues within 4Å: Chain A: K.27, C.28, P.29, K.30, F.31, K.34, A.51, V.52 Ligands: FWN.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:K.27, A:K.27, A:P.29, A:P.29, A:K.30, A:K.30, A:F.31, A:F.31 Hydrogen bonds: A:K.30, A:V.52 Water bridges: A:N.12, A:K.27, A:K.27, A:K.27, A:C.28, A:K.30, A:K.30, A:K.30, A:K.30 Salt bridges: A:K.27, A:K.30, A:K.30, A:K.34 pi-Cation interactions: A:K.27, A:K.30, A:K.30, A:K.30

1 x FWN: 2-[2-(2-ethoxyethoxy)ethoxy]ethanol(Non-functional Binders)

FWN.2: 1 residues within 4Å: Ligands: FWQ.1 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: K.6, K.15, Y.16, K.17, D.23 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.6, A:K.17, A:D.23, A:D.23 Water bridges: A:K.15, A:D.23

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: N.33, D.53, C.54, D.55 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alex, J.M. et al., Calixarene-mediated assembly of a small antifungal protein. Iucrj (2019)

Release Date

2019-02-13

Peptides

Pc24g00380 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pc24g00380 protein

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