SMTL ID : 6hap.1

Adenylate kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x AP5: BIS(ADENOSINE)-5'-PENTAPHOSPHATE(Non-covalent)

AP5.1: 30 residues within 4Å: Chain A: P.9, G.10, A.11, G.12, K.13, G.14, T.15, T.31, G.32, L.35, R.36, M.53, K.57, L.58, V.59, V.64, G.85, R.88, Q.92, R.119, R.123, V.132, Y.133, H.134, F.137, R.156, R.167, K.200, P.201, V.202 30 PLIP interactions: 30 interactions with chain A Hydrogen bonds: A:G.10, A:A.11, A:G.12, A:K.13, A:G.14, A:T.15, A:T.15, A:T.15, A:T.31, A:K.57, A:V.59, A:D.84, A:R.88, A:R.88, A:Q.92, A:Q.92, A:R.119, A:R.123, A:K.200 Salt bridges: A:K.13, A:K.13, A:R.36, A:R.88, A:R.123, A:R.123, A:R.156, A:R.156, A:R.167 pi-Cation interactions: A:R.88, A:R.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kantaev, R. et al., Manipulating the Folding Landscape of a Multidomain Protein. J.Phys.Chem.B (2018)

Release Date

2019-08-28

Peptides

Adenylate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate kinase