SMTL ID : 6hb0.1 (1 other biounit)

Crystal structure of MSMEG_1712 from Mycobacterium smegmatis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

10 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.319, H.322 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.319, A:H.322, H2O.5 ZN.2: 4 residues within 4Å: Chain A: K.42, E.46, H.318, H.322 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.46, A:H.318, A:H.322, H2O.5 ZN.3: 2 residues within 4Å: Chain A: E.47, H.321 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.47, A:H.321, H2O.1 ZN.4: 4 residues within 4Å: Chain A: E.128, C.263, T.290, D.292 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.128, A:E.128, A:C.263, A:D.292, H2O.1 ZN.5: 1 residues within 4Å: Chain A: D.296 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.296, H2O.3 ZN.6: 1 residues within 4Å: Chain A: D.114 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.114, H2O.1, H2O.1, H2O.2, H2O.3 ZN.7: 2 residues within 4Å: Chain A: D.160, D.164 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.160, A:D.164, H2O.1, H2O.3, H2O.5 ZN.8: 2 residues within 4Å: Chain A: D.216, D.217 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.216, A:D.217 ZN.9: 3 residues within 4Å: Chain A: E.316, H.317 Ligands: ZN.10 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.316, A:H.317, H2O.4 ZN.10: 3 residues within 4Å: Chain A: E.316, H.320 Ligands: ZN.9 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.316, A:H.320, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, M. et al., Detection and Characterization of a Mycobacterial L-Arabinofuranose ABC Transporter Identified with a Rapid Lipoproteomics Protocol. Cell Chem Biol (2019)

Release Date

2019-05-01

Peptides

ABC transporter periplasmic-binding protein YtfQ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ABC transporter periplasmic-binding protein YtfQ

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