SMTL ID : 6hck.1

The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with dipeptide Leu-Leu

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x LEU: LEUCINE(Non-covalent)

LEU.1: 7 residues within 4Å: Chain A: Y.64, K.66, Y.128, Q.148, I.151, L.152 Ligands: LEU.2 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:K.66, A:L.152 Hydrogen bonds: A:Q.148 LEU.2: 8 residues within 4Å: Chain A: Q.63, Y.64, Y.65, K.66, F.69, Q.125, W.226 Ligands: LEU.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.125, A:W.226 Hydrogen bonds: A:Y.64, A:K.66 Salt bridges: A:K.66

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: N.32, D.35, Q.37, E.38 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.35, A:E.38 Water bridges: A:S.73, A:S.73 NA.4: 5 residues within 4Å: Chain B: N.32, D.35, Q.37, E.38, S.73 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.38, B:S.73 Water bridges: B:N.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krypotou, E. et al., Control of Bacterial Virulence through the Peptide Signature of the Habitat. Cell Rep (2019)

Release Date

2019-02-13

Peptides

Listeriolysin regulatory protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Listeriolysin regulatory protein

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