- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 8LE: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] 2-methyl-2-oxidanyl-propanoate(Non-covalent)
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
AMP.2: 17 residues within 4Å:- Chain A: K.97, G.251, E.252, P.253, D.274, C.275, G.276, S.277, M.278, A.279, E.280, D.344, I.366, R.369, M.373, N.380
- Ligands: 8LE.1
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:G.251, A:D.274, A:A.279, A:D.344, A:R.369, A:N.380
- Water bridges: A:D.344
- Salt bridges: A:K.97
AMP.5: 17 residues within 4Å:- Chain B: K.97, G.251, E.252, P.253, D.274, C.275, G.276, S.277, M.278, A.279, E.280, D.344, I.366, R.369, M.373, N.380
- Ligands: 8LE.4
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:G.251, B:D.274, B:A.279, B:D.344, B:R.369, B:N.380
- Salt bridges: B:K.97
- 2 x COA: COENZYME A(Non-covalent)
COA.3: 22 residues within 4Å:- Chain A: A.170, V.171, Y.175, A.197, G.198, P.200, G.201, S.203, Y.219, G.220, T.221, Y.224, H.227, S.250, G.251, R.377, G.378, E.379, M.410, V.448, R.449
- Chain B: A.199
16 PLIP interactions:15 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:G.198, A:G.201, A:S.203, A:S.203, A:S.203, A:R.377, A:R.377, A:R.449
- Water bridges: A:G.378, A:R.449
- Salt bridges: A:H.227, A:R.377, A:R.377, A:R.449
- pi-Stacking: A:Y.224
- Hydrophobic interactions: B:A.199
COA.6: 22 residues within 4Å:- Chain A: A.199
- Chain B: A.170, V.171, Y.175, A.197, G.198, P.200, G.201, S.203, Y.219, G.220, T.221, Y.224, H.227, S.250, G.251, R.377, G.378, E.379, M.410, V.448, R.449
19 PLIP interactions:18 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:G.198, B:G.201, B:S.203, B:S.203, B:S.203, B:T.221, B:R.377, B:R.377, B:R.449
- Water bridges: B:Y.224, B:G.378, B:E.412, B:R.449
- Salt bridges: B:H.227, B:R.377, B:R.377, B:R.449
- pi-Stacking: B:Y.224
- Hydrophobic interactions: A:A.199
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zahn, M. et al., Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle. J.Mol.Biol. (2019)
- Release Date
- 2019-08-28
- Peptides
- 2-hydroxyisobutyryl-CoA synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 8LE: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] 2-methyl-2-oxidanyl-propanoate(Non-covalent)
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zahn, M. et al., Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle. J.Mol.Biol. (2019)
- Release Date
- 2019-08-28
- Peptides
- 2-hydroxyisobutyryl-CoA synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A