SMTL ID : 6hh1.1

Structure of c-Kit with allosteric inhibitor 3G8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: Y.111, E.135, H.176, G.177 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.111, A:E.135, A:G.177 Salt bridges: A:H.176

1 x G4E: ~{N}-(2,3-dimethylphenyl)-5-(4-pyridin-4-yloxyphenyl)-4~{H}-1,2,4-triazol-3-amine(Non-covalent)

G4E.2: 19 residues within 4Å: Chain A: L.31, V.39, A.57, K.59, E.76, V.79, L.80, V.90, T.106, E.107, Y.108, C.109, C.162, H.164, L.173, I.182, C.183, D.184, F.185 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.31, A:V.39, A:A.57, A:V.79, A:L.80, A:V.90, A:F.185 Hydrogen bonds: A:K.59, A:C.109, A:D.184 Water bridges: A:D.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wrasidlo, W.J. et al., Structure of c-Kit with allosteric inhibitor 3G8. To Be Published

Release Date

2019-09-18

Peptides

Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit