SMTL ID : 6hhj.1

Crystal Structure of AKT1 in Complex with Covalent-Allosteric AKT Inhibitor 24b

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x G4H: ~{N}-[1-methyl-2-oxidanylidene-3-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]benzimidazol-5-yl]propanamide(Covalent)

G4H.1: 19 residues within 4Å: Chain A: E.17, Y.18, W.80, I.84, S.205, L.210, T.211, L.264, K.268, V.271, Y.272, R.273, D.274, I.290, D.292, L.295, C.296, K.297, C.310 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:E.17, A:W.80, A:I.84, A:L.210, A:L.210, A:L.264, A:L.264, A:Y.272, A:R.273, A:D.292 Hydrogen bonds: A:S.205, A:K.297 Water bridges: A:N.54, A:K.268 Salt bridges: A:D.274 pi-Stacking: A:W.80, A:W.80, A:W.80 pi-Cation interactions: A:R.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Uhlenbrock, N. et al., Structural and chemical insights into the covalent-allosteric inhibition of the protein kinase Akt. Chem Sci (2019)

Release Date

2019-02-20

Peptides

RAC-alpha serine/threonine-protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RAC-alpha serine/threonine-protein kinase

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