SMTL ID : 6hk7.1

Crystal structure of GSK-3B in complex with pyrazine inhibitor C50

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: Y.21, Y.36, K.51, S.83, N.94 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.21, A:Y.21, A:K.51, A:S.83, A:S.83, A:N.94 Water bridges: A:S.84

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 4 residues within 4Å: Chain A: Q.150, N.151, C.164 Ligands: G8N.3 No protein-ligand interaction detected (PLIP)

1 x G8N: 3-azanyl-~{N}-(2-methoxyethyl)-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]pyrazine-2-carboxamide(Non-covalent)

G8N.3: 17 residues within 4Å: Chain A: I.27, F.32, V.35, A.48, K.50, L.97, D.98, Y.99, V.100, P.101, T.103, R.106, Q.150, L.153, C.164, D.165 Ligands: DMS.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.27, A:T.103, A:L.153 Hydrogen bonds: A:D.98, A:V.100, A:R.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gobbo, D. et al., Investigating Drug-Target Residence Time in Kinases through Enhanced Sampling Simulations. J Chem Theory Comput (2019)

Release Date

2019-07-17

Peptides

Glycogen synthase kinase-3 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycogen synthase kinase-3 beta