SMTL ID : 6hn3.1

wildtype form (apo) of human GPX4 with Se-Cys46

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.01 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: H.60, R.69 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: G.128, I.129, L.130, G.131, K.135 Ligand excluded by PLIP

2 x EOH: ETHANOL(Non-functional Binders)

EOH.3: 4 residues within 4Å: Chain A: Q.77, F.78, G.79, W.136 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.79 Water bridges: A:Q.77, A:K.80 EOH.5: 6 residues within 4Å: Chain A: R.5, H.15, E.16, F.17, S.18, N.28 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.18

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 2 residues within 4Å: Chain A: T.54, Q.55 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.54, A:Q.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moosmayer, D. et al., Crystal structures of the selenoprotein glutathione peroxidase 4 in its apo form and in complex with the covalently bound inhibitor ML162. Acta Crystallogr D Struct Biol (2021)

Release Date

2020-04-01

Peptides

Phospholipid hydroperoxide glutathione peroxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipid hydroperoxide glutathione peroxidase