SMTL ID : 6hnx.1

TRANSCRIPTIONAL REPRESSOR ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH BDM35133

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x GFZ: 4-(4-oxidanylidene-1'-propan-2-yl-spiro[3~{H}-chromene-2,4'-piperidine]-6-yl)-~{N}-phenyl-benzamide(Non-covalent)

GFZ.1: 21 residues within 4Å: Chain A: L.87, L.90, M.102, W.103, G.106, I.107, F.110, W.138, M.142, W.145, Y.148, T.149, V.152, E.156, N.176, N.179, E.180, L.183, F.184, W.207, Y.212 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.87, A:W.103, A:W.103, A:I.107, A:F.110, A:F.110, A:F.110, A:W.138, A:W.145, A:W.145, A:V.152, A:V.152, A:E.156, A:N.179, A:E.180, A:L.183, A:F.184, A:W.207 Hydrogen bonds: A:Y.148, A:N.176, A:N.179 GFZ.2: 21 residues within 4Å: Chain B: L.87, L.90, M.102, W.103, G.106, I.107, F.110, W.138, M.142, W.145, Y.148, T.149, V.152, E.156, N.176, N.179, E.180, L.183, F.184, W.207, Y.212 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:L.87, B:W.103, B:W.103, B:I.107, B:F.110, B:F.110, B:F.110, B:W.138, B:W.145, B:W.145, B:V.152, B:V.152, B:E.156, B:N.179, B:E.180, B:L.183, B:F.184, B:W.207 Hydrogen bonds: B:N.176, B:N.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanina, A. et al., A comprehensive analysis of the protein-ligand interactions in crystal structures of Mycobacterium tuberculosis EthR. Biochim Biophys Acta Proteins Proteom (2018)

Release Date

2018-12-26

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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