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SMTL ID : 6hnx.1
TRANSCRIPTIONAL REPRESSOR ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH BDM35133
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.70 Å
Oligo State
homo-dimer
Ligands
2 x
GFZ
:
4-(4-oxidanylidene-1'-propan-2-yl-spiro[3~{H}-chromene-2,4'-piperidine]-6-yl)-~{N}-phenyl-benzamide
(Non-covalent)
GFZ.1:
21 residues within 4Å:
Chain A:
L.87
,
L.90
,
M.102
,
W.103
,
G.106
,
I.107
,
F.110
,
W.138
,
M.142
,
W.145
,
Y.148
,
T.149
,
V.152
,
E.156
,
N.176
,
N.179
,
E.180
,
L.183
,
F.184
,
W.207
,
Y.212
21
PLIP interactions
:
21 interactions with chain A
Hydrophobic interactions:
A:L.87
,
A:W.103
,
A:W.103
,
A:I.107
,
A:F.110
,
A:F.110
,
A:F.110
,
A:W.138
,
A:W.145
,
A:W.145
,
A:V.152
,
A:V.152
,
A:E.156
,
A:N.179
,
A:E.180
,
A:L.183
,
A:F.184
,
A:W.207
Hydrogen bonds:
A:Y.148
,
A:N.176
,
A:N.179
GFZ.2:
21 residues within 4Å:
Chain B:
L.87
,
L.90
,
M.102
,
W.103
,
G.106
,
I.107
,
F.110
,
W.138
,
M.142
,
W.145
,
Y.148
,
T.149
,
V.152
,
E.156
,
N.176
,
N.179
,
E.180
,
L.183
,
F.184
,
W.207
,
Y.212
20
PLIP interactions
:
20 interactions with chain B
Hydrophobic interactions:
B:L.87
,
B:W.103
,
B:W.103
,
B:I.107
,
B:F.110
,
B:F.110
,
B:F.110
,
B:W.138
,
B:W.145
,
B:W.145
,
B:V.152
,
B:V.152
,
B:E.156
,
B:N.179
,
B:E.180
,
B:L.183
,
B:F.184
,
B:W.207
Hydrogen bonds:
B:N.176
,
B:N.179
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Tanina, A. et al., A comprehensive analysis of the protein-ligand interactions in crystal structures of Mycobacterium tuberculosis EthR. Biochim Biophys Acta Proteins Proteom (2018)
Release Date
2018-12-26
Peptides
HTH-type transcriptional regulator EthR:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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HTH-type transcriptional regulator EthR
Toggle Identical (AB)
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