SMTL ID : 6hoa.1

TRANSCRIPTIONAL REPRESSOR ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH BDM44830

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x GGN: 4-[2-(2-propylpyridin-4-yl)-1,3-thiazol-4-yl]-~{N}-[3,3,3-tris(fluoranyl)propyl]benzamide(Non-covalent)

GGN.1: 22 residues within 4Å: Chain A: L.99, L.102, A.103, P.106, M.114, W.115, G.118, I.119, F.122, F.126, W.150, M.154, W.157, Y.160, T.161, V.164, N.188, N.191, E.192, L.195, F.196, W.219 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.106, A:I.119, A:F.122, A:F.122, A:F.122, A:W.157, A:Y.160, A:W.219 Hydrogen bonds: A:N.188, A:N.191 GGN.3: 22 residues within 4Å: Chain B: L.99, L.102, A.103, P.106, M.114, W.115, G.118, I.119, F.122, F.126, W.150, M.154, W.157, Y.160, T.161, V.164, N.188, N.191, E.192, L.195, F.196, W.219 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:P.106, B:I.119, B:F.122, B:F.122, B:F.122, B:W.157, B:Y.160, B:W.219 Hydrogen bonds: B:N.188, B:N.191

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: D.166, R.169, T.177, L.178, P.179, A.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.166, A:R.169, A:A.180 GOL.4: 6 residues within 4Å: Chain B: D.166, R.169, T.177, L.178, P.179, A.180 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.166, B:R.169, B:A.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanina, A. et al., A comprehensive analysis of the protein-ligand interactions in crystal structures of Mycobacterium tuberculosis EthR. Biochim Biophys Acta Proteins Proteom (2018)

Release Date

2018-12-26

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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