SMTL ID : 6hoj.1

Structure of Beclin1 LIR motif bound to GABARAP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-trimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: T.102 Chain B: T.102 Chain C: T.102 9 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B, 3 interactions with chain C Hydrogen bonds: A:T.102, B:T.102, C:T.102, C:T.102 Water bridges: A:T.102, A:T.102, A:S.103, B:T.102, C:T.102

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain B: R.43 Chain C: L.7 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Birgisdottir, A.B. et al., Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs. Autophagy (2019)

Release Date

2019-02-27

Peptides

Beclin-1,Gamma-aminobutyric acid receptor-associated protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Beclin-1,Gamma-aminobutyric acid receptor-associated protein