SMTL ID : 6hpx.1

Crystal structure of ENL (MLLT1) in complex with compound 19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 9 residues within 4Å: Chain A: V.10, R.11, P.40, C.43, I.45, F.48, A.139, G.140, G.141 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.11, A:G.140 EDO.2: 2 residues within 4Å: Chain A: F.36, P.71 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.72 EDO.3: 4 residues within 4Å: Chain A: K.51, R.64, V.66, K.68 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.64, A:R.64, A:K.68, A:K.68 EDO.4: 5 residues within 4Å: Chain A: F.82, I.83, D.104, L.105, F.106 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.82

1 x GKQ: ~{N}-[(3-chlorophenyl)methyl]-1-(2-pyrrolidin-1-ylethyl)benzimidazole-5-carboxamide(Non-covalent)

GKQ.5: 8 residues within 4Å: Chain A: F.29, H.57, S.59, F.60, G.78, Y.79, A.80, G.81 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.29, A:F.29, A:Y.79, A:A.80 Hydrogen bonds: A:S.59, A:S.59, A:Y.79, A:A.80 pi-Stacking: A:H.57, A:H.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heidenreich, D. et al., Structure-Based Approach toward Identification of Inhibitory Fragments for Eleven-Nineteen-Leukemia Protein (ENL). J.Med.Chem. (2018)

Release Date

2018-11-28

Peptides

Protein ENL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein ENL

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