SMTL ID : 6hr8.2 (1 other biounit)

HMG-CoA reductase from Methanothermococcus thermolithotrophicus in complex with NADPH at 2.9 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 14 residues within 4Å: Chain A: T.187, R.188, H.189, T.213, D.215, A.216, G.218, M.219, N.220, M.221, V.367, G.368, G.369, G.388 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:T.187, A:R.188, A:H.189, A:D.215, A:D.215, A:D.215, A:G.218, A:M.219, A:N.220, A:M.221, A:G.369 Salt bridges: A:H.189 pi-Stacking: A:H.189 pi-Cation interactions: A:H.189 NAP.2: 13 residues within 4Å: Chain B: T.187, H.189, T.213, D.215, A.216, G.218, M.219, N.220, M.221, V.367, G.368, G.369, G.388 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:R.188, B:H.189, B:D.215, B:D.215, B:A.216, B:G.218, B:N.220, B:N.220, B:M.221, B:G.369 Salt bridges: B:H.189 pi-Stacking: B:H.189, B:H.189 NAP.3: 14 residues within 4Å: Chain C: T.187, R.188, H.189, T.213, D.215, A.216, G.218, M.219, N.220, M.221, V.367, G.368, G.369, G.388 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:T.187, C:T.187, C:R.188, C:H.189, C:D.215, C:D.215, C:G.218, C:M.219, C:N.220, C:M.221, C:G.369 Salt bridges: C:H.189 pi-Stacking: C:H.189 pi-Cation interactions: C:H.189 NAP.4: 13 residues within 4Å: Chain D: T.187, H.189, T.213, D.215, A.216, G.218, M.219, N.220, M.221, V.367, G.368, G.369, G.388 15 PLIP interactions: 15 interactions with chain D Hydrogen bonds: D:T.187, D:R.188, D:H.189, D:D.215, D:D.215, D:D.215, D:A.216, D:G.218, D:N.220, D:N.220, D:M.221, D:G.369 Salt bridges: D:H.189 pi-Stacking: D:H.189, D:H.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vogeli, B. et al., Crystal structure of archaeal HMG-CoA reductase: insights into structural changes of the C-terminal helix of the class-I enzyme. Febs Lett. (2019)

Release Date

2019-02-13

Peptides

HMG-CoA reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
E

D
F

HMG-CoA reductase

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