SMTL ID : 6hvf.1 (1 other biounit)

Kinase domain of cSrc in complex with compound 29B

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GUT: ~{N}-[3-[3-ethyl-6-[4-(4-methylpiperazin-1-yl)phenyl]-4-oxidanylidene-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]prop-2-enamide(Covalent)

GUT.1: 15 residues within 4Å: Chain A: L.26, V.34, A.46, V.76, M.91, E.92, Y.93, M.94, S.95, K.96, G.97, C.98, D.101, A.143, L.146 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.34, A:V.34, A:V.76 Hydrogen bonds: A:M.94 Water bridges: A:C.98, A:C.98

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: P.114, Q.115, D.118 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.118 EDO.3: 5 residues within 4Å: Chain A: K.74, A.121, Q.122, S.125, E.270 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.125, A:E.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lategahn, J. et al., Inhibition of osimertinib-resistant epidermal growth factor receptor EGFR-T790M/C797S. Chem Sci (2019)

Release Date

2019-10-23

Peptides

Proto-oncogene tyrosine-protein kinase Src: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Src

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