SMTL ID : 6hws.1

Keap1 - inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: R.34, L.35, A.36, D.37 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.34, A:D.37 Water bridges: A:R.34

1 x GX8: 2-[[4-[2-hydroxy-2-oxoethyl-(4-methoxyphenyl)sulfonyl-amino]-3-phenylmethoxy-phenyl]-(4-methoxyphenyl)sulfonyl-amino]ethanoic acid(Non-covalent)

GX8.2: 14 residues within 4Å: Chain A: Y.14, R.60, N.94, R.95, R.163, S.188, G.189, Y.205, Q.210, S.235, A.236, Y.252, F.257, S.282 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.14, A:A.236, A:Y.252, A:F.257, A:F.257 Hydrogen bonds: A:N.94, A:Q.210, A:S.235 Water bridges: A:S.43, A:S.43, A:S.188, A:S.188 Salt bridges: A:R.60, A:R.95 pi-Stacking: A:Y.205, A:Y.252 pi-Cation interactions: A:R.95

7 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: V.133, A.134, N.175 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.175 Water bridges: A:V.133 NA.4: 5 residues within 4Å: Chain A: N.61, S.63, G.66, N.67, T.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.63, A:T.68 NA.5: 2 residues within 4Å: Chain A: H.112, I.115 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.112 NA.6: 3 residues within 4Å: Chain A: C.114, I.115, H.116 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.116, A:H.116, A:H.116, A:R.139 NA.7: 3 residues within 4Å: Chain A: E.124, P.125, E.126 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.124, A:E.126 NA.8: 3 residues within 4Å: Chain A: L.19, S.20, Y.21 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.20, A:Y.21 Water bridges: A:Q.17, A:S.20 NA.9: 1 residues within 4Å: Chain A: M.79 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talapatra, S.K. et al., Keap1-inhibitor complex. To Be Published

Release Date

2019-10-30

Peptides

Kelch-like ECH-associated protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kelch-like ECH-associated protein 1

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