SMTL ID : 6i1i.1

Crystal structure of TP domain from Escherichia coli penicillin-binding protein 3 in complex with penicillin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x JPP: Piperacillin (Open Form)(Covalent)

JPP.1: 15 residues within 4Å: Chain A: S.67, V.104, S.119, N.121, F.177, Y.179, K.254, T.255, G.256, T.257, A.258, K.259, Y.267, Y.301, G.302 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:T.257, A:Y.301, A:Y.301 Hydrogen bonds: A:S.67, A:S.119, A:S.119, A:N.121, A:Y.179, A:T.257, A:T.257, A:T.257, A:K.259, A:G.302 Water bridges: A:T.255, A:G.303 Salt bridges: A:K.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bellini, D. et al., Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance. J.Mol.Biol. (2019)

Release Date

2019-11-20

Peptides

Peptidoglycan D,D-transpeptidase FtsI,Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI,Peptidoglycan D,D-transpeptidase FtsI

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