- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.98 Å
- Oligo State
- monomer
- Ligands
- 5 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 5 x CIT: CITRIC ACID(Non-functional Binders)
CIT.5: 4 residues within 4Å:- Chain A: Y.774, S.777, Q.781, K.783
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:K.783
- Hydrogen bonds: A:Y.774, A:S.777, A:K.783, A:K.783
- Salt bridges: A:K.783, A:K.783
CIT.6: 6 residues within 4Å:- Chain A: L.14, S.15, N.1037, E.1063
- Chain B: A.20
- Chain C: T.20
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:E.1063
- Hydrogen bonds: A:S.15, A:N.1037
CIT.7: 6 residues within 4Å:- Chain A: Q.1007, A.1080, F.1082, T.1083, S.1084, K.1085
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:K.1085
- Hydrogen bonds: A:Q.1007, A:A.1080, A:F.1082, A:T.1083, A:T.1083, A:T.1083, A:S.1084, A:S.1084, A:K.1085
- Salt bridges: A:R.919
CIT.14: 5 residues within 4Å:- Chain A: R.19, R.834, E.980
- Chain B: U.5
- Ligands: K.10
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:R.19, A:E.980
- Salt bridges: A:R.19, A:K.596, A:R.834, A:K.979
CIT.15: 4 residues within 4Å:- Chain A: T.843, H.844, K.853
- Chain B: A.1
5 PLIP interactions:5 interactions with chain A- Salt bridges: A:H.844, A:K.853, A:K.853, A:K.870, A:K.870
- 6 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
K.8: 4 residues within 4Å:- Chain A: L.516, I.587, Q.589, W.972
No protein-ligand interaction detected (PLIP)K.9: 2 residues within 4Å:- Chain A: H.991
- Chain B: A.18
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:H.991
K.10: 5 residues within 4Å:- Chain A: R.19, F.880, H.882
- Chain B: U.4
- Ligands: CIT.14
No protein-ligand interaction detected (PLIP)K.11: 5 residues within 4Å:- Chain A: L.67, S.68, V.70, Y.249, N.271
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:L.67
K.12: 1 residues within 4Å:- Chain A: D.262
No protein-ligand interaction detected (PLIP)K.16: 3 residues within 4Å:- Chain B: C.6, A.18, U.19
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Swarts, D.C. et al., Mechanistic Insights into the cis- and trans-Acting DNase Activities of Cas12a. Mol. Cell (2019)
- Release Date
- 2019-01-23
- Peptides
- CRISPR-associated endonuclease Cas12a: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.98 Å
- Oligo State
- monomer
- Ligands
- 5 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 5 x CIT: CITRIC ACID(Non-functional Binders)
- 6 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Swarts, D.C. et al., Mechanistic Insights into the cis- and trans-Acting DNase Activities of Cas12a. Mol. Cell (2019)
- Release Date
- 2019-01-23
- Peptides
- CRISPR-associated endonuclease Cas12a: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A