SMTL ID : 6i2z.1

Isolated globin domain of the Bordetella pertussis globin-coupled sensor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: F.42, A.52, F.55, K.64, L.65, M.69, W.72, K.94, V.95, V.98, H.99, I.102, I.104, L.108, V.109, A.113, M.153 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:F.42, A:F.42, A:A.52, A:F.55, A:L.65, A:W.72, A:V.95, A:V.98, A:I.104, A:L.108, A:V.109 Salt bridges: A:K.64, A:K.94 Metal complexes: A:H.99 HEM.2: 16 residues within 4Å: Chain B: F.42, M.46, A.52, F.55, L.65, S.68, M.69, W.72, V.95, V.98, H.99, I.102, I.104, L.108, V.109, A.113 14 PLIP interactions: 13 interactions with chain B, 1 Ligand-Water interactions, Hydrophobic interactions: B:F.42, B:A.52, B:F.55, B:L.65, B:W.72, B:V.95, B:I.102, B:I.104, B:L.108, B:V.109, B:A.113 pi-Stacking: B:H.99 Metal complexes: B:H.99, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Germani, F. et al., Structural and Functional Characterization of the Globin-Coupled Sensors ofAzotobacter vinelandiiandBordetella pertussis. Antioxid.Redox Signal. (2020)

Release Date

2019-10-16

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein

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