- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x CU: COPPER (II) ION(Non-covalent)
- 9 x ACT: ACETATE ION(Non-functional Binders)
ACT.3: 8 residues within 4Å:- Chain A: H.136, H.206, E.288, D.314, H.381, H.437
- Ligands: CU.1, ACT.4
4 PLIP interactions:4 interactions with chain A- Salt bridges: A:H.136, A:H.206, A:H.381, A:H.437
ACT.4: 11 residues within 4Å:- Chain A: H.135, H.136, V.205, H.206, E.288, D.314, H.381, H.528
- Ligands: CU.1, CU.2, ACT.3
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:V.205
- Water bridges: A:K.103
- Salt bridges: A:K.103, A:H.135, A:H.136, A:H.528
ACT.7: 7 residues within 4Å:- Chain B: H.136, H.206, D.314, H.381, H.437
- Ligands: CU.5, ACT.8
7 PLIP interactions:7 interactions with chain B- Water bridges: B:H.437, B:H.482, B:H.528
- Salt bridges: B:H.136, B:H.206, B:H.381, B:H.437
ACT.8: 9 residues within 4Å:- Chain B: H.135, H.136, H.206, D.314, H.381, H.528
- Ligands: CU.5, CU.6, ACT.7
6 PLIP interactions:6 interactions with chain B- Water bridges: B:K.103, B:Q.156
- Salt bridges: B:K.103, B:H.135, B:H.136, B:H.528
ACT.11: 8 residues within 4Å:- Chain C: H.136, H.206, E.288, H.381, F.436, H.437
- Ligands: CU.9, ACT.12
4 PLIP interactions:4 interactions with chain C- Salt bridges: C:H.136, C:H.206, C:H.381, C:H.437
ACT.12: 8 residues within 4Å:- Chain C: H.135, H.136, H.206, E.288, H.528
- Ligands: CU.9, CU.10, ACT.11
5 PLIP interactions:5 interactions with chain C- Water bridges: C:K.103
- Salt bridges: C:K.103, C:H.135, C:H.136, C:H.528
ACT.16: 8 residues within 4Å:- Chain D: H.136, H.206, D.314, H.381, H.437
- Ligands: CU.14, ACT.17, GOL.19
4 PLIP interactions:4 interactions with chain D- Salt bridges: D:H.136, D:H.206, D:H.381, D:H.437
ACT.17: 9 residues within 4Å:- Chain D: H.135, H.136, H.206, D.314, H.381, H.528
- Ligands: CU.14, CU.15, ACT.16
6 PLIP interactions:6 interactions with chain D- Water bridges: D:K.103, D:L.289
- Salt bridges: D:K.103, D:H.135, D:H.136, D:H.528
ACT.18: 2 residues within 4Å:- Chain D: F.242, D.243
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:D.243
- Water bridges: D:F.242
- Salt bridges: D:K.284, D:R.306
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.13: 8 residues within 4Å:- Chain C: M.451, W.453, P.458, N.459, G.460, E.474, V.475, D.476
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:M.451, C:V.475
GOL.19: 7 residues within 4Å:- Chain D: P.291, F.436, H.437, W.452, M.481, H.482
- Ligands: ACT.16
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:T.450, D:T.450, D:H.482
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tikhonova, T.V. et al., Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2018-11-28
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x CU: COPPER (II) ION(Non-covalent)
- 9 x ACT: ACETATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tikhonova, T.V. et al., Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2018-11-28
- Peptides
- Uncharacterized protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D