SMTL ID : 6i4y.1

X-ray structure of the human mitochondrial PRELID3b-TRIAP1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 14 residues within 4Å: Chain A: D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.16, A:K.16, A:E.112, A:E.112, A:E.154 GLC-GLC.3: 14 residues within 4Å: Chain C: D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:K.16, C:K.16, C:E.112, C:E.112, C:E.154

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain B: T.109, S.118, D.120 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.109, B:S.118 NA.4: 3 residues within 4Å: Chain D: T.109, S.118, D.120 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.118, D:S.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miliara, X. et al., Structural determinants of lipid specificity within Ups/PRELI lipid transfer proteins. Nat Commun (2019)

Release Date

2019-03-20

Peptides

Maltose transport system, substrate-binding protein,TP53-regulated inhibitor of apoptosis 1: AC
PRELI domain containing protein 3B: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Maltose transport system, substrate-binding protein,TP53-regulated inhibitor of apoptosis 1

PRELI domain containing protein 3B

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