SMTL ID : 6i8d.1

STRUCTURE OF ESTER-HYDROLASE EH1AB1 FROM THE METAGENOME OF LAKE ARREO COMPLEXED WITH A DERIVATIVE OF BUTYL 4-NITROPHENYL HEXYLPHOSPHONATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

4 x H7N: butoxy(hexyl)phosphinic acid(Covalent)

H7N.1: 7 residues within 4Å: Chain A: G.102, G.103, G.104, S.175, A.176, F.223, H.300 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.223 Hydrogen bonds: A:G.103, A:G.104, A:A.176 H7N.2: 8 residues within 4Å: Chain A: M.27, D.28, E.220, G.221, Y.222, F.223, L.224, S.225 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:M.27 Hydrogen bonds: A:G.221, A:Y.222 H7N.6: 9 residues within 4Å: Chain B: G.102, G.103, G.104, S.175, A.176, F.223, L.224, H.228, H.300 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:F.223, B:L.224 Hydrogen bonds: B:G.103, B:G.104, B:A.176 H7N.7: 8 residues within 4Å: Chain B: M.27, D.28, E.220, G.221, Y.222, F.223, S.225, A.227 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:M.27, B:E.220, B:A.227 Hydrogen bonds: B:G.221, B:Y.222

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 6 residues within 4Å: Chain A: R.273, D.274, R.277, N.294 Chain B: I.284, E.285 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.274, A:R.277 PEG.4: 1 residues within 4Å: Chain A: E.66 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.66 PEG.8: 5 residues within 4Å: Chain A: I.284 Chain B: R.273, D.274, R.277, N.294 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.277

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: S.208, R.215, K.226, W.233 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.208, A:R.215, A:D.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cea-Rama, I. et al., STRUCTURE OF ESTER-HYDROLASE EH1AB1 FROM THE METAGENOME OF LAKE ARREO COMPLEXED WITH A DERIVATIVE OF BUTYL 4-NITROPHENYL HEXYLPHOSPHONATE. To Be Published

Release Date

2019-11-27

Peptides

EH1AB1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

EH1AB1

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