SMTL ID : 6iaz.1

The archaeal Methanocaldococcus infernus Elp3 with N-terminus deletion (1-46)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: S.34, G.35, V.36, R.305, H.421, F.423, G.424 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.35, A:V.36, A:G.424 Salt bridges: A:H.421 SO4.2: 6 residues within 4Å: Chain A: R.167, P.168, Q.192, R.204, G.205, H.206 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.205 Salt bridges: A:R.167, A:R.204, A:H.206 SO4.3: 9 residues within 4Å: Chain A: V.422, Q.439, H.440, M.441, G.442, Y.443, G.444, R.445, Y.475 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:H.440, A:G.442, A:Y.443, A:G.444, A:R.445, A:Y.475 Water bridges: A:M.441, A:M.441 Salt bridges: A:R.445 SO4.4: 5 residues within 4Å: Chain A: P.301, K.302, W.303, R.343, E.371 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.302, A:W.303, A:E.371 Water bridges: A:E.371, A:E.371 Salt bridges: A:R.343 SO4.5: 4 residues within 4Å: Chain A: W.128, K.131, R.132, E.141 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.128, A:E.141 Salt bridges: A:K.131, A:R.132 SO4.6: 4 residues within 4Å: Chain A: R.477, K.482, R.483, M.488 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.483 Salt bridges: A:R.477

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, T.Y. et al., The Elongator subunit Elp3 is a non-canonical tRNA acetyltransferase. Nat Commun (2019)

Release Date

2019-02-20

Peptides

Histone acetyltransferase, ELP3 family: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone acetyltransferase, ELP3 family