SMTL ID : 6ict.3 (3 other biounits)

Structure of SETD3 bound to SAH and methylated actin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 17 residues within 4Å: Chain A: R.76, E.104, E.105, F.107, P.181, T.254, R.255, D.276, M.277, C.278, N.279, H.280, Y.314, S.326, F.328, F.330 Chain B: H.8 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:F.107, A:F.107, A:N.279, A:H.280, A:H.280 Water bridges: A:R.76, A:D.185, A:D.185, A:T.254, A:T.254, A:S.326, A:G.327 Salt bridges: A:R.76, A:R.255 pi-Stacking: A:F.328, A:F.328

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Q. et al., Structural insights into SETD3-mediated histidine methylation on beta-actin. Elife (2019)

Release Date

2019-02-27

Peptides

Histone-lysine N-methyltransferase setd3: A
Actin, cytoplasmic 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
H

Histone-lysine N-methyltransferase setd3

Actin, cytoplasmic 1

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